Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-DOBP13765 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HLA-DOBP13765 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DOBP13765 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 AC009090.5-201ENST00000624886 2285 ntBASIC14.25□□□□□ -0.13
HLA-DOBP13765 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 AL512356.2-201ENST00000546955 174 ntBASIC14.25□□□□□ -0.13
HLA-DOBP13765 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HLA-DOBP13765 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DOBP13765 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-DOBP13765 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HLA-DOBP13765 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.24□□□□□ -0.13
HLA-DOBP13765 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-DOBP13765 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-DOBP13765 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-DOBP13765 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HLA-DOBP13765 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.24□□□□□ -0.13
HLA-DOBP13765 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 AZGP1P1-201ENST00000411909 902 ntBASIC14.24□□□□□ -0.13
HLA-DOBP13765 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 TSEN15P1-201ENST00000423257 515 ntBASIC14.24□□□□□ -0.13
HLA-DOBP13765 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HLA-DOBP13765 EEF1DP4-201ENST00000446006 880 ntBASIC14.24□□□□□ -0.13
HLA-DOBP13765 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-DOBP13765 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-DOBP13765 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 AP001160.2-201ENST00000596071 487 ntBASIC14.24□□□□□ -0.13
HLA-DOBP13765 AL450472.2-201ENST00000603663 1156 ntBASIC14.24□□□□□ -0.13
HLA-DOBP13765 AC139530.3-201ENST00000620344 690 ntBASIC14.24□□□□□ -0.13
HLA-DOBP13765 AC079781.4-201ENST00000641908 219 ntBASIC14.24□□□□□ -0.13
HLA-DOBP13765 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-DOBP13765 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.24□□□□□ -0.13
HLA-DOBP13765 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
HLA-DOBP13765 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.24□□□□□ -0.13
HLA-DOBP13765 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 AC144831.1-201ENST00000573312 2656 ntBASIC14.24□□□□□ -0.13
HLA-DOBP13765 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms