Protein–RNA interactions for Protein: P13646

KRT13, Keratin, type I cytoskeletal 13, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT13P13646 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT13P13646 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT13P13646 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT13P13646 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT13P13646 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT13P13646 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT13P13646 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.4■□□□□ 0.38
KRT13P13646 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT13P13646 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT13P13646 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
KRT13P13646 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT13P13646 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.4■□□□□ 0.38
KRT13P13646 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT13P13646 TSEN15P1-201ENST00000423257 515 ntBASIC17.4■□□□□ 0.38
KRT13P13646 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT13P13646 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT13P13646 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT13P13646 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT13P13646 AL512356.2-201ENST00000546955 174 ntBASIC17.4■□□□□ 0.38
KRT13P13646 BANF1P1-201ENST00000553684 263 ntBASIC17.4■□□□□ 0.38
KRT13P13646 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT13P13646 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT13P13646 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT13P13646 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT13P13646 AL450472.2-201ENST00000603663 1156 ntBASIC17.4■□□□□ 0.38
KRT13P13646 RN7SL828P-201ENST00000607615 303 ntBASIC17.4■□□□□ 0.38
KRT13P13646 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT13P13646 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT13P13646 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
KRT13P13646 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT13P13646 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT13P13646 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.4■□□□□ 0.38
KRT13P13646 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT13P13646 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT13P13646 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT13P13646 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT13P13646 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT13P13646 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT13P13646 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT13P13646 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT13P13646 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT13P13646 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT13P13646 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KRT13P13646 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
KRT13P13646 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
KRT13P13646 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KRT13P13646 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
KRT13P13646 MIR600HG-201ENST00000449175 5984 ntBASIC17.39■□□□□ 0.37
KRT13P13646 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT13P13646 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT13P13646 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT13P13646 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT13P13646 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT13P13646 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT13P13646 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT13P13646 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT13P13646 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT13P13646 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.39■□□□□ 0.37
KRT13P13646 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT13P13646 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT13P13646 HLA-J-203ENST00000494367 1087 ntBASIC17.39■□□□□ 0.37
KRT13P13646 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT13P13646 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.39■□□□□ 0.37
KRT13P13646 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT13P13646 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT13P13646 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT13P13646 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT13P13646 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
KRT13P13646 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT13P13646 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT13P13646 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT13P13646 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.39■□□□□ 0.37
KRT13P13646 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
KRT13P13646 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT13P13646 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT13P13646 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.39■□□□□ 0.37
KRT13P13646 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT13P13646 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT13P13646 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT13P13646 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
KRT13P13646 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT13P13646 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT13P13646 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
KRT13P13646 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT13P13646 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT13P13646 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT13P13646 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
KRT13P13646 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT13P13646 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT13P13646 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT13P13646 AC018892.3-201ENST00000623986 2499 ntBASIC17.38■□□□□ 0.37
KRT13P13646 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT13P13646 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT13P13646 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT13P13646 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.38■□□□□ 0.37
KRT13P13646 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT13P13646 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
KRT13P13646 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.38■□□□□ 0.37
KRT13P13646 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
KRT13P13646 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms