Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHGAP10645 AL139099.5-201ENST00000635274 300 ntBASIC22.67■■□□□ 1.22
CHGAP10645 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHGAP10645 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHGAP10645 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHGAP10645 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CHGAP10645 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CHGAP10645 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC22.67■■□□□ 1.22
CHGAP10645 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC22.67■■□□□ 1.22
CHGAP10645 CYP2AB1P-202ENST00000454440 1456 ntBASIC22.66■■□□□ 1.22
CHGAP10645 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHGAP10645 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHGAP10645 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHGAP10645 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHGAP10645 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHGAP10645 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC22.66■■□□□ 1.22
CHGAP10645 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHGAP10645 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHGAP10645 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
CHGAP10645 BRF1-202ENST00000379932 884 ntTSL 5 BASIC22.66■■□□□ 1.22
CHGAP10645 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CHGAP10645 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC22.66■■□□□ 1.22
CHGAP10645 FAM197Y7-201ENST00000432892 766 ntBASIC22.66■■□□□ 1.22
CHGAP10645 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHGAP10645 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC22.66■■□□□ 1.22
CHGAP10645 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC22.66■■□□□ 1.22
CHGAP10645 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHGAP10645 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHGAP10645 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
CHGAP10645 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC22.66■■□□□ 1.22
CHGAP10645 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC22.66■■□□□ 1.22
CHGAP10645 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC22.66■■□□□ 1.22
CHGAP10645 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC22.66■■□□□ 1.22
CHGAP10645 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHGAP10645 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHGAP10645 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHGAP10645 AGER-206ENST00000375070 1463 ntTSL 5 BASIC22.66■■□□□ 1.22
CHGAP10645 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC22.66■■□□□ 1.22
CHGAP10645 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHGAP10645 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHGAP10645 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHGAP10645 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC22.65■■□□□ 1.22
CHGAP10645 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC22.65■■□□□ 1.22
CHGAP10645 AC011676.5-201ENST00000624864 2660 ntBASIC22.65■■□□□ 1.22
CHGAP10645 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHGAP10645 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CHGAP10645 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC22.65■■□□□ 1.22
CHGAP10645 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHGAP10645 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHGAP10645 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHGAP10645 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHGAP10645 TEX30-203ENST00000376022 828 ntTSL 2 BASIC22.65■■□□□ 1.22
CHGAP10645 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC22.65■■□□□ 1.22
CHGAP10645 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC22.65■■□□□ 1.22
CHGAP10645 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CHGAP10645 AHRR-211ENST00000515206 462 ntTSL 5 BASIC22.65■■□□□ 1.22
CHGAP10645 DUX4L45-201ENST00000566406 1057 ntBASIC22.65■■□□□ 1.22
CHGAP10645 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC22.65■■□□□ 1.22
CHGAP10645 KSR1-207ENST00000578981 748 ntTSL 4 BASIC22.65■■□□□ 1.22
CHGAP10645 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC22.65■■□□□ 1.22
CHGAP10645 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC22.65■■□□□ 1.22
CHGAP10645 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHGAP10645 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHGAP10645 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHGAP10645 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHGAP10645 AC022211.2-201ENST00000585075 2527 ntBASIC22.65■■□□□ 1.22
CHGAP10645 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHGAP10645 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC22.65■■□□□ 1.22
CHGAP10645 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC22.65■■□□□ 1.22
CHGAP10645 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHGAP10645 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHGAP10645 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHGAP10645 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC22.65■■□□□ 1.22
CHGAP10645 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHGAP10645 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHGAP10645 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC22.64■■□□□ 1.22
CHGAP10645 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CHGAP10645 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHGAP10645 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC22.64■■□□□ 1.22
CHGAP10645 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
CHGAP10645 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHGAP10645 LRRFIP1P1-201ENST00000498774 2246 ntBASIC22.64■■□□□ 1.21
CHGAP10645 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
CHGAP10645 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHGAP10645 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHGAP10645 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC22.64■■□□□ 1.21
CHGAP10645 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CHGAP10645 CNN2P8-201ENST00000421872 913 ntBASIC22.64■■□□□ 1.21
CHGAP10645 FAM86HP-204ENST00000513466 959 ntBASIC22.64■■□□□ 1.21
CHGAP10645 AC078819.1-201ENST00000547454 765 ntBASIC22.64■■□□□ 1.21
CHGAP10645 AC012085.1-201ENST00000548270 765 ntBASIC22.64■■□□□ 1.21
CHGAP10645 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CHGAP10645 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC22.64■■□□□ 1.21
CHGAP10645 CMC2-214ENST00000565925 640 ntTSL 5 BASIC22.64■■□□□ 1.21
CHGAP10645 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CHGAP10645 AC025279.2-201ENST00000569730 653 ntBASIC22.64■■□□□ 1.21
CHGAP10645 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CHGAP10645 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHGAP10645 AC093813.1-201ENST00000605066 256 ntBASIC22.64■■□□□ 1.21
CHGAP10645 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms