Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCNYL3P0C7X3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 SPTLC1P1-201ENST00000447199 261 ntBASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 SERBP1P3-201ENST00000459980 809 ntBASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 SPDYE22P-201ENST00000582158 798 ntBASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 GGT3P-204ENST00000453783 1664 ntBASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL3P0C7X3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 BTBD7P1-201ENST00000447253 1453 ntBASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 AC007541.1-201ENST00000570282 1469 ntBASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 AL512652.2-201ENST00000625156 1716 ntBASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 GPAA1P2-202ENST00000606848 1787 ntBASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 AL589702.1-201ENST00000641229 1509 ntBASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 AL353779.1-201ENST00000434793 351 ntBASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 RN7SL618P-201ENST00000477850 296 ntBASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 AL133215.2-201ENST00000609242 977 ntBASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL3P0C7X3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms