Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HOXC6P09630 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HOXC6P09630 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.77■□□□□ 0.44
HOXC6P09630 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HOXC6P09630 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.77■□□□□ 0.44
HOXC6P09630 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HOXC6P09630 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HOXC6P09630 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HOXC6P09630 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HOXC6P09630 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HOXC6P09630 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HOXC6P09630 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HOXC6P09630 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
HOXC6P09630 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.77■□□□□ 0.44
HOXC6P09630 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.77■□□□□ 0.44
HOXC6P09630 AL022328.3-201ENST00000607943 679 ntBASIC17.77■□□□□ 0.44
HOXC6P09630 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.77■□□□□ 0.44
HOXC6P09630 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.77■□□□□ 0.44
HOXC6P09630 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HOXC6P09630 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HOXC6P09630 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
HOXC6P09630 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HOXC6P09630 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.77■□□□□ 0.44
HOXC6P09630 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HOXC6P09630 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
HOXC6P09630 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
HOXC6P09630 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
HOXC6P09630 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.77■□□□□ 0.43
HOXC6P09630 AL138709.1-201ENST00000614840 1693 ntBASIC17.77■□□□□ 0.43
HOXC6P09630 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HOXC6P09630 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.77■□□□□ 0.43
HOXC6P09630 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
HOXC6P09630 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HOXC6P09630 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HOXC6P09630 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HOXC6P09630 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HOXC6P09630 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.76■□□□□ 0.43
HOXC6P09630 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HOXC6P09630 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.76■□□□□ 0.43
HOXC6P09630 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HOXC6P09630 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HOXC6P09630 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.76■□□□□ 0.43
HOXC6P09630 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.76■□□□□ 0.43
HOXC6P09630 CALR4P-201ENST00000431943 946 ntBASIC17.76■□□□□ 0.43
HOXC6P09630 FAM197Y7-201ENST00000432892 766 ntBASIC17.76■□□□□ 0.43
HOXC6P09630 Z93015.1-201ENST00000451718 390 ntBASIC17.76■□□□□ 0.43
HOXC6P09630 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.76■□□□□ 0.43
HOXC6P09630 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.76■□□□□ 0.43
HOXC6P09630 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HOXC6P09630 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HOXC6P09630 AP001258.2-201ENST00000529891 490 ntBASIC17.76■□□□□ 0.43
HOXC6P09630 AC078819.1-201ENST00000547454 765 ntBASIC17.76■□□□□ 0.43
HOXC6P09630 AC012085.1-201ENST00000548270 765 ntBASIC17.76■□□□□ 0.43
HOXC6P09630 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.76■□□□□ 0.43
HOXC6P09630 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.76■□□□□ 0.43
HOXC6P09630 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HOXC6P09630 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.76■□□□□ 0.43
HOXC6P09630 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HOXC6P09630 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HOXC6P09630 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HOXC6P09630 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.76■□□□□ 0.43
HOXC6P09630 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HOXC6P09630 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HOXC6P09630 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HOXC6P09630 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HOXC6P09630 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC6P09630 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
HOXC6P09630 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.75■□□□□ 0.43
HOXC6P09630 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.75■□□□□ 0.43
HOXC6P09630 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC6P09630 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC6P09630 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC6P09630 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC6P09630 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HOXC6P09630 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.75■□□□□ 0.43
HOXC6P09630 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC6P09630 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC6P09630 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC6P09630 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC6P09630 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC6P09630 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HOXC6P09630 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC6P09630 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.75■□□□□ 0.43
HOXC6P09630 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.75■□□□□ 0.43
HOXC6P09630 AP001582.1-201ENST00000525856 295 ntBASIC17.75■□□□□ 0.43
HOXC6P09630 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC6P09630 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC6P09630 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.75■□□□□ 0.43
HOXC6P09630 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.75■□□□□ 0.43
HOXC6P09630 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.75■□□□□ 0.43
HOXC6P09630 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.75■□□□□ 0.43
HOXC6P09630 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.75■□□□□ 0.43
HOXC6P09630 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC6P09630 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC6P09630 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HOXC6P09630 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC6P09630 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC6P09630 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
HOXC6P09630 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.75■□□□□ 0.43
HOXC6P09630 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms