Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL5A2P05997 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL5A2P05997 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
COL5A2P05997 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
COL5A2P05997 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL5A2P05997 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL5A2P05997 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL5A2P05997 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
COL5A2P05997 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL5A2P05997 KRT8P4-201ENST00000509735 1454 ntBASIC20.44■□□□□ 0.86
COL5A2P05997 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL5A2P05997 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC20.44■□□□□ 0.86
COL5A2P05997 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
COL5A2P05997 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC20.44■□□□□ 0.86
COL5A2P05997 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL5A2P05997 AL645937.2-201ENST00000396808 931 ntBASIC20.43■□□□□ 0.86
COL5A2P05997 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL5A2P05997 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL5A2P05997 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL5A2P05997 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL5A2P05997 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC20.43■□□□□ 0.86
COL5A2P05997 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC20.43■□□□□ 0.86
COL5A2P05997 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC20.43■□□□□ 0.86
COL5A2P05997 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.43■□□□□ 0.86
COL5A2P05997 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL5A2P05997 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL5A2P05997 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.43■□□□□ 0.86
COL5A2P05997 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL5A2P05997 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
COL5A2P05997 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL5A2P05997 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC20.43■□□□□ 0.86
COL5A2P05997 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL5A2P05997 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL5A2P05997 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL5A2P05997 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL5A2P05997 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
COL5A2P05997 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.43■□□□□ 0.86
COL5A2P05997 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL5A2P05997 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL5A2P05997 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL5A2P05997 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL5A2P05997 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL5A2P05997 DPM3-202ENST00000368399 517 ntBASIC20.43■□□□□ 0.86
COL5A2P05997 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL5A2P05997 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
COL5A2P05997 AL008707.1-201ENST00000422498 534 ntBASIC20.43■□□□□ 0.86
COL5A2P05997 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC20.43■□□□□ 0.86
COL5A2P05997 OARD1-204ENST00000464633 717 ntTSL 2 BASIC20.43■□□□□ 0.86
COL5A2P05997 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC20.43■□□□□ 0.86
COL5A2P05997 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC20.43■□□□□ 0.86
COL5A2P05997 MBP-227ENST00000526111 581 ntTSL 4 BASIC20.43■□□□□ 0.86
COL5A2P05997 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC20.43■□□□□ 0.86
COL5A2P05997 AC007787.1-201ENST00000588095 1583 ntBASIC20.43■□□□□ 0.86
COL5A2P05997 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC20.43■□□□□ 0.86
COL5A2P05997 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
COL5A2P05997 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC20.43■□□□□ 0.86
COL5A2P05997 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.42■□□□□ 0.86
COL5A2P05997 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
COL5A2P05997 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL5A2P05997 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL5A2P05997 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL5A2P05997 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL5A2P05997 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL5A2P05997 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
COL5A2P05997 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL5A2P05997 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL5A2P05997 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL5A2P05997 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC20.42■□□□□ 0.86
COL5A2P05997 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL5A2P05997 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL5A2P05997 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL5A2P05997 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL5A2P05997 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL5A2P05997 UFM1-202ENST00000379649 846 ntTSL 4 BASIC20.42■□□□□ 0.86
COL5A2P05997 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL5A2P05997 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC20.42■□□□□ 0.86
COL5A2P05997 AL136309.1-201ENST00000403917 691 ntBASIC20.42■□□□□ 0.86
COL5A2P05997 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC20.42■□□□□ 0.86
COL5A2P05997 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC20.42■□□□□ 0.86
COL5A2P05997 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC20.42■□□□□ 0.86
COL5A2P05997 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC20.42■□□□□ 0.86
COL5A2P05997 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.42■□□□□ 0.86
COL5A2P05997 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
COL5A2P05997 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
COL5A2P05997 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL5A2P05997 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL5A2P05997 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL5A2P05997 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL5A2P05997 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
COL5A2P05997 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
COL5A2P05997 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.41■□□□□ 0.86
COL5A2P05997 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL5A2P05997 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL5A2P05997 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
COL5A2P05997 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL5A2P05997 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL5A2P05997 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
COL5A2P05997 AP003419.4-201ENST00000616071 517 ntBASIC20.41■□□□□ 0.86
COL5A2P05997 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC20.41■□□□□ 0.86
COL5A2P05997 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms