Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHGBP05060 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHGBP05060 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CHGBP05060 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.98■□□□□ 0.63
CHGBP05060 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHGBP05060 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHGBP05060 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHGBP05060 AC105250.1-201ENST00000509378 2057 ntBASIC18.98■□□□□ 0.63
CHGBP05060 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHGBP05060 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.98■□□□□ 0.63
CHGBP05060 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
CHGBP05060 SLED1-202ENST00000512051 380 ntBASIC18.98■□□□□ 0.63
CHGBP05060 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.98■□□□□ 0.63
CHGBP05060 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.98■□□□□ 0.63
CHGBP05060 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHGBP05060 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.98■□□□□ 0.63
CHGBP05060 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.98■□□□□ 0.63
CHGBP05060 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.98■□□□□ 0.63
CHGBP05060 AL662799.1-202ENST00000614205 422 ntBASIC18.98■□□□□ 0.63
CHGBP05060 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CHGBP05060 AC136621.1-201ENST00000624017 2304 ntBASIC18.98■□□□□ 0.63
CHGBP05060 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHGBP05060 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CHGBP05060 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHGBP05060 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHGBP05060 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHGBP05060 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHGBP05060 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHGBP05060 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHGBP05060 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.98■□□□□ 0.63
CHGBP05060 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
CHGBP05060 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CHGBP05060 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHGBP05060 LINC00554-201ENST00000564841 3011 ntBASIC18.98■□□□□ 0.63
CHGBP05060 AC127383.1-201ENST00000444697 1800 ntBASIC18.97■□□□□ 0.63
CHGBP05060 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.97■□□□□ 0.63
CHGBP05060 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHGBP05060 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CHGBP05060 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
CHGBP05060 SLC7A15P-201ENST00000424028 1363 ntBASIC18.97■□□□□ 0.63
CHGBP05060 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.97■□□□□ 0.63
CHGBP05060 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CHGBP05060 AC105917.1-201ENST00000506637 2539 ntBASIC18.97■□□□□ 0.63
CHGBP05060 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CHGBP05060 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.97■□□□□ 0.63
CHGBP05060 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CHGBP05060 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHGBP05060 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHGBP05060 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.97■□□□□ 0.63
CHGBP05060 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.97■□□□□ 0.63
CHGBP05060 MEIS3P1-201ENST00000495167 958 ntBASIC18.97■□□□□ 0.63
CHGBP05060 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.97■□□□□ 0.63
CHGBP05060 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.97■□□□□ 0.63
CHGBP05060 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.97■□□□□ 0.63
CHGBP05060 AC008494.3-201ENST00000606615 944 ntBASIC18.97■□□□□ 0.63
CHGBP05060 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.97■□□□□ 0.63
CHGBP05060 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.97■□□□□ 0.63
CHGBP05060 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CHGBP05060 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHGBP05060 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHGBP05060 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHGBP05060 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.97■□□□□ 0.63
CHGBP05060 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.97■□□□□ 0.63
CHGBP05060 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHGBP05060 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHGBP05060 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHGBP05060 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.97■□□□□ 0.63
CHGBP05060 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHGBP05060 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CHGBP05060 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHGBP05060 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHGBP05060 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHGBP05060 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CHGBP05060 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.96■□□□□ 0.63
CHGBP05060 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHGBP05060 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.96■□□□□ 0.63
CHGBP05060 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHGBP05060 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CHGBP05060 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CHGBP05060 DGCR5-201ENST00000399539 862 ntBASIC18.96■□□□□ 0.63
CHGBP05060 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.96■□□□□ 0.63
CHGBP05060 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.96■□□□□ 0.63
CHGBP05060 PIN1P1-201ENST00000412108 996 ntBASIC18.96■□□□□ 0.63
CHGBP05060 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHGBP05060 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.96■□□□□ 0.63
CHGBP05060 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHGBP05060 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHGBP05060 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.96■□□□□ 0.63
CHGBP05060 CTBP2P3-201ENST00000585629 1255 ntBASIC18.96■□□□□ 0.63
CHGBP05060 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.96■□□□□ 0.63
CHGBP05060 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHGBP05060 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CHGBP05060 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.96■□□□□ 0.63
CHGBP05060 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHGBP05060 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHGBP05060 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHGBP05060 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.96■□□□□ 0.63
CHGBP05060 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.96■□□□□ 0.63
CHGBP05060 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHGBP05060 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms