Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 IGLL3P-201ENST00000412472 434 ntBASIC14.36□□□□□ -0.11
HLA-DPB1P04440 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.36□□□□□ -0.11
HLA-DPB1P04440 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 HCG4B-203ENST00000450128 991 ntBASIC14.36□□□□□ -0.11
HLA-DPB1P04440 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 ACTL9-202ENST00000612068 1252 ntBASIC14.36□□□□□ -0.11
HLA-DPB1P04440 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 AC090616.6-203ENST00000579186 1945 ntBASIC14.36□□□□□ -0.11
HLA-DPB1P04440 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 AC005089.1-201ENST00000619486 2241 ntBASIC14.35□□□□□ -0.11
HLA-DPB1P04440 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 AC105250.1-201ENST00000509378 2057 ntBASIC14.35□□□□□ -0.11
HLA-DPB1P04440 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 CICP23-201ENST00000605013 2741 ntBASIC14.35□□□□□ -0.11
HLA-DPB1P04440 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 FAM185BP-201ENST00000443595 716 ntBASIC14.35□□□□□ -0.11
HLA-DPB1P04440 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 AL513480.1-201ENST00000451731 511 ntBASIC14.35□□□□□ -0.11
HLA-DPB1P04440 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 AC106730.1-201ENST00000566722 1090 ntBASIC14.35□□□□□ -0.11
HLA-DPB1P04440 AC018845.2-201ENST00000568326 409 ntBASIC14.35□□□□□ -0.11
HLA-DPB1P04440 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 AC064836.3-201ENST00000607928 673 ntBASIC14.35□□□□□ -0.11
HLA-DPB1P04440 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HLA-DPB1P04440 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms