Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GAPDHP04406 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.36□□□□□ -0.27
GAPDHP04406 PGAM5P1-201ENST00000518923 814 ntBASIC13.36□□□□□ -0.27
GAPDHP04406 FAM86C2P-203ENST00000528684 1004 ntBASIC13.36□□□□□ -0.27
GAPDHP04406 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.36□□□□□ -0.27
GAPDHP04406 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.36□□□□□ -0.27
GAPDHP04406 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.36□□□□□ -0.27
GAPDHP04406 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GAPDHP04406 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GAPDHP04406 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.36□□□□□ -0.27
GAPDHP04406 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GAPDHP04406 CICP4-201ENST00000447359 2812 ntBASIC13.36□□□□□ -0.27
GAPDHP04406 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.36□□□□□ -0.27
GAPDHP04406 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GAPDHP04406 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.36□□□□□ -0.27
GAPDHP04406 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
GAPDHP04406 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
GAPDHP04406 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GAPDHP04406 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GAPDHP04406 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.36□□□□□ -0.27
GAPDHP04406 CICP23-201ENST00000605013 2741 ntBASIC13.36□□□□□ -0.27
GAPDHP04406 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GAPDHP04406 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
GAPDHP04406 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.36□□□□□ -0.27
GAPDHP04406 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.36□□□□□ -0.27
GAPDHP04406 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GAPDHP04406 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
GAPDHP04406 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.36□□□□□ -0.27
GAPDHP04406 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
GAPDHP04406 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
GAPDHP04406 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GAPDHP04406 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.35□□□□□ -0.27
GAPDHP04406 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GAPDHP04406 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GAPDHP04406 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GAPDHP04406 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.35□□□□□ -0.27
GAPDHP04406 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
GAPDHP04406 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
GAPDHP04406 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.35□□□□□ -0.27
GAPDHP04406 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GAPDHP04406 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.35□□□□□ -0.27
GAPDHP04406 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.35□□□□□ -0.27
GAPDHP04406 FAM58CP-201ENST00000435741 640 ntBASIC13.35□□□□□ -0.27
GAPDHP04406 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
GAPDHP04406 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.35□□□□□ -0.27
GAPDHP04406 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
GAPDHP04406 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.35□□□□□ -0.27
GAPDHP04406 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
GAPDHP04406 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.35□□□□□ -0.27
GAPDHP04406 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GAPDHP04406 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
GAPDHP04406 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GAPDHP04406 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.35□□□□□ -0.27
GAPDHP04406 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.35□□□□□ -0.27
GAPDHP04406 AC005622.1-201ENST00000636801 1703 ntBASIC13.35□□□□□ -0.27
GAPDHP04406 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.35□□□□□ -0.27
GAPDHP04406 U82695.1-201ENST00000635752 1889 ntBASIC13.35□□□□□ -0.27
GAPDHP04406 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.35□□□□□ -0.27
GAPDHP04406 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GAPDHP04406 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GAPDHP04406 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
GAPDHP04406 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
GAPDHP04406 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.35□□□□□ -0.27
GAPDHP04406 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GAPDHP04406 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.35□□□□□ -0.27
GAPDHP04406 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GAPDHP04406 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
GAPDHP04406 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.34□□□□□ -0.27
GAPDHP04406 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.34□□□□□ -0.27
GAPDHP04406 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.34□□□□□ -0.27
GAPDHP04406 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.34□□□□□ -0.27
GAPDHP04406 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.34□□□□□ -0.27
GAPDHP04406 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.34□□□□□ -0.27
GAPDHP04406 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
GAPDHP04406 AC087481.3-201ENST00000602886 1894 ntBASIC13.34□□□□□ -0.27
GAPDHP04406 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.34□□□□□ -0.27
GAPDHP04406 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
GAPDHP04406 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 AL671277.1-201ENST00000429656 993 ntBASIC13.34□□□□□ -0.27
GAPDHP04406 ACTG1P14-201ENST00000446382 1122 ntBASIC13.34□□□□□ -0.27
GAPDHP04406 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
GAPDHP04406 DNAJB3-201ENST00000446806 729 ntBASIC13.34□□□□□ -0.27
GAPDHP04406 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.34□□□□□ -0.27
GAPDHP04406 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.34□□□□□ -0.27
GAPDHP04406 RARRES2P8-201ENST00000566335 367 ntBASIC13.34□□□□□ -0.27
GAPDHP04406 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.34□□□□□ -0.27
GAPDHP04406 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.34□□□□□ -0.27
GAPDHP04406 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms