Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL589702.1-201ENST00000641229 1509 ntBASIC14.92□□□□□ -0.02
PDGFAP04085 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFAP04085 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFAP04085 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFAP04085 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFAP04085 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFAP04085 AL513523.2-202ENST00000427283 2040 ntBASIC14.92□□□□□ -0.02
PDGFAP04085 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
PDGFAP04085 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PDGFAP04085 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFAP04085 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFAP04085 SPDYE17-201ENST00000412399 783 ntBASIC14.92□□□□□ -0.02
PDGFAP04085 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.92□□□□□ -0.02
PDGFAP04085 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
PDGFAP04085 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.92□□□□□ -0.02
PDGFAP04085 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.92□□□□□ -0.02
PDGFAP04085 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFAP04085 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.92□□□□□ -0.02
PDGFAP04085 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.92□□□□□ -0.02
PDGFAP04085 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.92□□□□□ -0.02
PDGFAP04085 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.92□□□□□ -0.02
PDGFAP04085 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.92□□□□□ -0.02
PDGFAP04085 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
PDGFAP04085 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.92□□□□□ -0.02
PDGFAP04085 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFAP04085 AL033527.4-201ENST00000641026 673 ntBASIC14.92□□□□□ -0.02
PDGFAP04085 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFAP04085 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
PDGFAP04085 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFAP04085 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFAP04085 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.92□□□□□ -0.02
PDGFAP04085 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.92□□□□□ -0.02
PDGFAP04085 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.92□□□□□ -0.02
PDGFAP04085 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.92□□□□□ -0.02
PDGFAP04085 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.92□□□□□ -0.02
PDGFAP04085 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PDGFAP04085 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFAP04085 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFAP04085 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFAP04085 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFAP04085 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.92□□□□□ -0.02
PDGFAP04085 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFAP04085 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
PDGFAP04085 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.92□□□□□ -0.02
PDGFAP04085 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PDGFAP04085 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.91□□□□□ -0.02
PDGFAP04085 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFAP04085 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFAP04085 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFAP04085 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.91□□□□□ -0.02
PDGFAP04085 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PDGFAP04085 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFAP04085 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFAP04085 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.91□□□□□ -0.02
PDGFAP04085 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.91□□□□□ -0.02
PDGFAP04085 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.91□□□□□ -0.02
PDGFAP04085 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PDGFAP04085 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFAP04085 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFAP04085 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFAP04085 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.91□□□□□ -0.02
PDGFAP04085 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PDGFAP04085 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.91□□□□□ -0.02
PDGFAP04085 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.91□□□□□ -0.02
PDGFAP04085 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.91□□□□□ -0.02
PDGFAP04085 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PDGFAP04085 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PDGFAP04085 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.91□□□□□ -0.02
PDGFAP04085 SDHAP3-202ENST00000515467 728 ntBASIC14.91□□□□□ -0.02
PDGFAP04085 SNX29P1-201ENST00000548357 1007 ntBASIC14.91□□□□□ -0.02
PDGFAP04085 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
PDGFAP04085 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PDGFAP04085 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.91□□□□□ -0.02
PDGFAP04085 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.91□□□□□ -0.02
PDGFAP04085 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFAP04085 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFAP04085 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PDGFAP04085 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PDGFAP04085 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFAP04085 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFAP04085 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFAP04085 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFAP04085 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
PDGFAP04085 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFAP04085 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFAP04085 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFAP04085 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PDGFAP04085 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFAP04085 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFAP04085 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFAP04085 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.9□□□□□ -0.02
PDGFAP04085 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
PDGFAP04085 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFAP04085 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFAP04085 AC144831.1-201ENST00000573312 2656 ntBASIC14.9□□□□□ -0.02
PDGFAP04085 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PDGFAP04085 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PDGFAP04085 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.9□□□□□ -0.02
PDGFAP04085 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFAP04085 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms