Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCRP04035 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.78■□□□□ 0.44
HMGCRP04035 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.78■□□□□ 0.44
HMGCRP04035 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCRP04035 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.78■□□□□ 0.44
HMGCRP04035 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.78■□□□□ 0.44
HMGCRP04035 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCRP04035 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCRP04035 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCRP04035 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCRP04035 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCRP04035 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HMGCRP04035 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.78■□□□□ 0.44
HMGCRP04035 MTX1P1-201ENST00000440904 838 ntBASIC17.78■□□□□ 0.44
HMGCRP04035 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCRP04035 PHKG1P2-201ENST00000457537 863 ntBASIC17.78■□□□□ 0.44
HMGCRP04035 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.78■□□□□ 0.44
HMGCRP04035 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.78■□□□□ 0.44
HMGCRP04035 AC020914.3-201ENST00000594712 304 ntBASIC17.78■□□□□ 0.44
HMGCRP04035 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.78■□□□□ 0.44
HMGCRP04035 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.78■□□□□ 0.44
HMGCRP04035 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCRP04035 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCRP04035 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCRP04035 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCRP04035 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCRP04035 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCRP04035 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.78■□□□□ 0.44
HMGCRP04035 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.78■□□□□ 0.44
HMGCRP04035 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCRP04035 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCRP04035 AC084018.2-201ENST00000613093 2607 ntBASIC17.78■□□□□ 0.44
HMGCRP04035 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.78■□□□□ 0.44
HMGCRP04035 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCRP04035 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCRP04035 HLA-A-202ENST00000376806 1854 ntBASIC17.78■□□□□ 0.44
HMGCRP04035 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCRP04035 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCRP04035 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCRP04035 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCRP04035 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.77■□□□□ 0.44
HMGCRP04035 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCRP04035 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.77■□□□□ 0.44
HMGCRP04035 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
HMGCRP04035 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCRP04035 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.77■□□□□ 0.44
HMGCRP04035 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.77■□□□□ 0.44
HMGCRP04035 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.77■□□□□ 0.44
HMGCRP04035 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.77■□□□□ 0.44
HMGCRP04035 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCRP04035 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCRP04035 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCRP04035 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCRP04035 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCRP04035 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCRP04035 AL662890.1-201ENST00000396818 632 ntBASIC17.77■□□□□ 0.44
HMGCRP04035 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.77■□□□□ 0.44
HMGCRP04035 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.77■□□□□ 0.44
HMGCRP04035 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
HMGCRP04035 MIR663B-201ENST00000408361 115 ntBASIC17.77■□□□□ 0.44
HMGCRP04035 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.77■□□□□ 0.44
HMGCRP04035 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.77■□□□□ 0.44
HMGCRP04035 AP001582.1-201ENST00000525856 295 ntBASIC17.77■□□□□ 0.44
HMGCRP04035 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.77■□□□□ 0.44
HMGCRP04035 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.77■□□□□ 0.44
HMGCRP04035 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HMGCRP04035 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCRP04035 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCRP04035 AC016629.1-201ENST00000596579 586 ntBASIC17.77■□□□□ 0.44
HMGCRP04035 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.77■□□□□ 0.44
HMGCRP04035 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.77■□□□□ 0.44
HMGCRP04035 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCRP04035 DRD5P1-201ENST00000456605 1438 ntBASIC17.77■□□□□ 0.44
HMGCRP04035 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCRP04035 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.77■□□□□ 0.43
HMGCRP04035 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HMGCRP04035 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.77■□□□□ 0.43
HMGCRP04035 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
HMGCRP04035 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.77■□□□□ 0.43
HMGCRP04035 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HMGCRP04035 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMGCRP04035 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMGCRP04035 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
HMGCRP04035 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCRP04035 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.76■□□□□ 0.43
HMGCRP04035 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCRP04035 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCRP04035 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HMGCRP04035 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.76■□□□□ 0.43
HMGCRP04035 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCRP04035 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.76■□□□□ 0.43
HMGCRP04035 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HMGCRP04035 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCRP04035 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HMGCRP04035 AC005077.2-201ENST00000449786 690 ntBASIC17.76■□□□□ 0.43
HMGCRP04035 BX284668.4-201ENST00000453917 508 ntBASIC17.76■□□□□ 0.43
HMGCRP04035 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.76■□□□□ 0.43
HMGCRP04035 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCRP04035 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCRP04035 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms