Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.31■□□□□ 0.36
VTNP04004 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.31■□□□□ 0.36
VTNP04004 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.31■□□□□ 0.36
VTNP04004 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.31■□□□□ 0.36
VTNP04004 AC124283.3-201ENST00000570869 594 ntBASIC17.31■□□□□ 0.36
VTNP04004 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.31■□□□□ 0.36
VTNP04004 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.31■□□□□ 0.36
VTNP04004 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
VTNP04004 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.31■□□□□ 0.36
VTNP04004 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.31■□□□□ 0.36
VTNP04004 AC015936.2-201ENST00000593177 259 ntBASIC17.31■□□□□ 0.36
VTNP04004 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.31■□□□□ 0.36
VTNP04004 MIR6752-201ENST00000618442 71 ntBASIC17.31■□□□□ 0.36
VTNP04004 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
VTNP04004 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VTNP04004 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.31■□□□□ 0.36
VTNP04004 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VTNP04004 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VTNP04004 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
VTNP04004 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VTNP04004 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
VTNP04004 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.31■□□□□ 0.36
VTNP04004 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.31■□□□□ 0.36
VTNP04004 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VTNP04004 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VTNP04004 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.31■□□□□ 0.36
VTNP04004 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.31■□□□□ 0.36
VTNP04004 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.31■□□□□ 0.36
VTNP04004 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VTNP04004 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VTNP04004 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.31■□□□□ 0.36
VTNP04004 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
VTNP04004 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.3■□□□□ 0.36
VTNP04004 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.3■□□□□ 0.36
VTNP04004 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VTNP04004 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VTNP04004 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VTNP04004 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
VTNP04004 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VTNP04004 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VTNP04004 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
VTNP04004 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.3■□□□□ 0.36
VTNP04004 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VTNP04004 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VTNP04004 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VTNP04004 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VTNP04004 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
VTNP04004 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
VTNP04004 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VTNP04004 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.3■□□□□ 0.36
VTNP04004 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.3■□□□□ 0.36
VTNP04004 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.3■□□□□ 0.36
VTNP04004 AC022210.1-201ENST00000449856 793 ntBASIC17.3■□□□□ 0.36
VTNP04004 KRT18P43-201ENST00000469825 1281 ntBASIC17.3■□□□□ 0.36
VTNP04004 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
VTNP04004 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.3■□□□□ 0.36
VTNP04004 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.3■□□□□ 0.36
VTNP04004 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.3■□□□□ 0.36
VTNP04004 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.3■□□□□ 0.36
VTNP04004 MIR5189-201ENST00000577370 114 ntBASIC17.3■□□□□ 0.36
VTNP04004 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.3■□□□□ 0.36
VTNP04004 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.3■□□□□ 0.36
VTNP04004 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.3■□□□□ 0.36
VTNP04004 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.3■□□□□ 0.36
VTNP04004 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
VTNP04004 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VTNP04004 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VTNP04004 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VTNP04004 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VTNP04004 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VTNP04004 LINC02447-202ENST00000501888 2146 ntBASIC17.3■□□□□ 0.36
VTNP04004 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.3■□□□□ 0.36
VTNP04004 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.3■□□□□ 0.36
VTNP04004 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VTNP04004 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
VTNP04004 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VTNP04004 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VTNP04004 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VTNP04004 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
VTNP04004 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VTNP04004 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.29■□□□□ 0.36
VTNP04004 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.29■□□□□ 0.36
VTNP04004 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VTNP04004 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VTNP04004 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VTNP04004 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VTNP04004 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VTNP04004 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VTNP04004 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
VTNP04004 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
VTNP04004 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VTNP04004 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VTNP04004 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VTNP04004 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.29■□□□□ 0.36
VTNP04004 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.29■□□□□ 0.36
VTNP04004 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VTNP04004 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VTNP04004 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.29■□□□□ 0.36
VTNP04004 AC234783.1-201ENST00000441761 496 ntBASIC17.29■□□□□ 0.36
VTNP04004 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms