Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
TRBV12-3P01733 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TRBV12-3P01733 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
TRBV12-3P01733 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.28□□□□□ -0.44
TRBV12-3P01733 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TRBV12-3P01733 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.28□□□□□ -0.44
TRBV12-3P01733 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TRBV12-3P01733 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TRBV12-3P01733 MIR770-201ENST00000390219 98 ntBASIC12.28□□□□□ -0.44
TRBV12-3P01733 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.28□□□□□ -0.44
TRBV12-3P01733 SERBP1P3-201ENST00000459980 809 ntBASIC12.28□□□□□ -0.44
TRBV12-3P01733 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.28□□□□□ -0.44
TRBV12-3P01733 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.28□□□□□ -0.44
TRBV12-3P01733 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.28□□□□□ -0.44
TRBV12-3P01733 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.28□□□□□ -0.44
TRBV12-3P01733 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.28□□□□□ -0.44
TRBV12-3P01733 MIR4313-201ENST00000580760 101 ntBASIC12.28□□□□□ -0.44
TRBV12-3P01733 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.28□□□□□ -0.44
TRBV12-3P01733 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.28□□□□□ -0.44
TRBV12-3P01733 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.28□□□□□ -0.44
TRBV12-3P01733 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.28□□□□□ -0.44
TRBV12-3P01733 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.28□□□□□ -0.44
TRBV12-3P01733 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.28□□□□□ -0.44
TRBV12-3P01733 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRBV12-3P01733 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.28□□□□□ -0.44
TRBV12-3P01733 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV12-3P01733 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV12-3P01733 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV12-3P01733 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV12-3P01733 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
TRBV12-3P01733 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV12-3P01733 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV12-3P01733 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV12-3P01733 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV12-3P01733 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.27□□□□□ -0.44
TRBV12-3P01733 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.27□□□□□ -0.44
TRBV12-3P01733 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV12-3P01733 AC092127.1-201ENST00000567093 3455 ntBASIC12.27□□□□□ -0.44
TRBV12-3P01733 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
TRBV12-3P01733 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.27□□□□□ -0.44
TRBV12-3P01733 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
TRBV12-3P01733 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TRBV12-3P01733 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRBV12-3P01733 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRBV12-3P01733 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRBV12-3P01733 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
TRBV12-3P01733 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRBV12-3P01733 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.27□□□□□ -0.45
TRBV12-3P01733 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRBV12-3P01733 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRBV12-3P01733 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.27□□□□□ -0.45
TRBV12-3P01733 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.27□□□□□ -0.45
TRBV12-3P01733 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRBV12-3P01733 FO393414.2-201ENST00000405153 598 ntBASIC12.27□□□□□ -0.45
TRBV12-3P01733 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.27□□□□□ -0.45
TRBV12-3P01733 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.27□□□□□ -0.45
TRBV12-3P01733 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.27□□□□□ -0.45
TRBV12-3P01733 BASP1P1-201ENST00000430708 665 ntBASIC12.27□□□□□ -0.45
TRBV12-3P01733 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.27□□□□□ -0.45
TRBV12-3P01733 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.27□□□□□ -0.45
TRBV12-3P01733 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TRBV12-3P01733 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRBV12-3P01733 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.27□□□□□ -0.45
TRBV12-3P01733 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
TRBV12-3P01733 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRBV12-3P01733 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.27□□□□□ -0.45
TRBV12-3P01733 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.27□□□□□ -0.45
TRBV12-3P01733 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.27□□□□□ -0.45
TRBV12-3P01733 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRBV12-3P01733 AC044860.1-202ENST00000559481 777 ntBASIC12.27□□□□□ -0.45
TRBV12-3P01733 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.27□□□□□ -0.45
TRBV12-3P01733 MIR6069-201ENST00000620069 79 ntBASIC12.27□□□□□ -0.45
TRBV12-3P01733 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.27□□□□□ -0.45
TRBV12-3P01733 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRBV12-3P01733 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.27□□□□□ -0.45
TRBV12-3P01733 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRBV12-3P01733 AC087499.5-201ENST00000452760 1342 ntBASIC12.27□□□□□ -0.45
TRBV12-3P01733 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms