Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFBP01127 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFBP01127 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFBP01127 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFBP01127 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFBP01127 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.75■□□□□ 0.11
PDGFBP01127 KLF2P2-201ENST00000416807 1039 ntBASIC15.75■□□□□ 0.11
PDGFBP01127 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.75■□□□□ 0.11
PDGFBP01127 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.75■□□□□ 0.11
PDGFBP01127 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFBP01127 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.75■□□□□ 0.11
PDGFBP01127 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.75■□□□□ 0.11
PDGFBP01127 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFBP01127 AC234782.1-201ENST00000451950 919 ntBASIC15.75■□□□□ 0.11
PDGFBP01127 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.75■□□□□ 0.11
PDGFBP01127 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFBP01127 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.75■□□□□ 0.11
PDGFBP01127 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.75■□□□□ 0.11
PDGFBP01127 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFBP01127 PPY2P-201ENST00000582808 702 ntBASIC15.75■□□□□ 0.11
PDGFBP01127 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFBP01127 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFBP01127 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.75■□□□□ 0.11
PDGFBP01127 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.75■□□□□ 0.11
PDGFBP01127 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.75■□□□□ 0.11
PDGFBP01127 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFBP01127 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFBP01127 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.75■□□□□ 0.11
PDGFBP01127 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.75■□□□□ 0.11
PDGFBP01127 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFBP01127 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFBP01127 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PDGFBP01127 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
PDGFBP01127 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.74■□□□□ 0.11
PDGFBP01127 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PDGFBP01127 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFBP01127 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFBP01127 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFBP01127 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
PDGFBP01127 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFBP01127 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFBP01127 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFBP01127 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFBP01127 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
PDGFBP01127 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFBP01127 ACTBP8-201ENST00000403258 1108 ntBASIC15.74■□□□□ 0.11
PDGFBP01127 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC15.74■□□□□ 0.11
PDGFBP01127 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.74■□□□□ 0.11
PDGFBP01127 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC15.74■□□□□ 0.11
PDGFBP01127 AC005740.2-201ENST00000511085 419 ntBASIC15.74■□□□□ 0.11
PDGFBP01127 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.74■□□□□ 0.11
PDGFBP01127 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFBP01127 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFBP01127 RN7SL48P-201ENST00000579283 293 ntBASIC15.74■□□□□ 0.11
PDGFBP01127 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.74■□□□□ 0.11
PDGFBP01127 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.74■□□□□ 0.11
PDGFBP01127 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.74■□□□□ 0.11
PDGFBP01127 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.74■□□□□ 0.11
PDGFBP01127 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PDGFBP01127 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
PDGFBP01127 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.74■□□□□ 0.11
PDGFBP01127 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFBP01127 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.74■□□□□ 0.11
PDGFBP01127 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.74■□□□□ 0.11
PDGFBP01127 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFBP01127 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFBP01127 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PDGFBP01127 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.74■□□□□ 0.11
PDGFBP01127 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFBP01127 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFBP01127 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFBP01127 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.73■□□□□ 0.11
PDGFBP01127 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFBP01127 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFBP01127 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFBP01127 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFBP01127 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PDGFBP01127 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFBP01127 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PDGFBP01127 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PDGFBP01127 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.73■□□□□ 0.11
PDGFBP01127 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PDGFBP01127 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.73■□□□□ 0.11
PDGFBP01127 AL627389.1-201ENST00000413508 1182 ntBASIC15.73■□□□□ 0.11
PDGFBP01127 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.73■□□□□ 0.11
PDGFBP01127 AL008707.1-201ENST00000422498 534 ntBASIC15.73■□□□□ 0.11
PDGFBP01127 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PDGFBP01127 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC15.73■□□□□ 0.11
PDGFBP01127 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.73■□□□□ 0.11
PDGFBP01127 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.73■□□□□ 0.11
PDGFBP01127 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.73■□□□□ 0.11
PDGFBP01127 AC135983.4-201ENST00000564116 1262 ntBASIC15.73■□□□□ 0.11
PDGFBP01127 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFBP01127 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.73■□□□□ 0.11
PDGFBP01127 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PDGFBP01127 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFBP01127 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PDGFBP01127 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFBP01127 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFBP01127 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms