Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TNFRSF6BO95407 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
TNFRSF6BO95407 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TNFRSF6BO95407 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
TNFRSF6BO95407 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC11.61□□□□□ -0.55
TNFRSF6BO95407 KRT18P1-202ENST00000452408 1331 ntBASIC11.6□□□□□ -0.55
TNFRSF6BO95407 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 DNAJC24-202ENST00000465995 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 AJ011931.1-201ENST00000618749 2492 ntBASIC11.6□□□□□ -0.55
TNFRSF6BO95407 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.6□□□□□ -0.55
TNFRSF6BO95407 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 VMO1-203ENST00000416307 712 ntTSL 2 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 AC245100.5-201ENST00000452108 331 ntBASIC11.6□□□□□ -0.55
TNFRSF6BO95407 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TNFRSF6BO95407 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 ADAMTS7P1-201ENST00000613213 4793 ntBASIC11.59□□□□□ -0.55
TNFRSF6BO95407 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 RDX-218ENST00000544551 4117 ntTSL 2 BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 PTCHD3P3-201ENST00000403073 906 ntBASIC11.59□□□□□ -0.55
TNFRSF6BO95407 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 AL136038.3-201ENST00000561909 1096 ntBASIC11.59□□□□□ -0.55
TNFRSF6BO95407 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TNFRSF6BO95407 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms