Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG5O95196 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.06■□□□□ 0.32
CSPG5O95196 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.06■□□□□ 0.32
CSPG5O95196 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.06■□□□□ 0.32
CSPG5O95196 AC243960.2-201ENST00000600996 747 ntBASIC17.06■□□□□ 0.32
CSPG5O95196 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CSPG5O95196 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.06■□□□□ 0.32
CSPG5O95196 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.06■□□□□ 0.32
CSPG5O95196 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG5O95196 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG5O95196 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG5O95196 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG5O95196 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.06■□□□□ 0.32
CSPG5O95196 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CSPG5O95196 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG5O95196 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.06■□□□□ 0.32
CSPG5O95196 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG5O95196 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG5O95196 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG5O95196 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.06■□□□□ 0.32
CSPG5O95196 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CSPG5O95196 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.06■□□□□ 0.32
CSPG5O95196 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CSPG5O95196 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CSPG5O95196 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG5O95196 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG5O95196 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG5O95196 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG5O95196 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG5O95196 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG5O95196 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CSPG5O95196 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG5O95196 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG5O95196 AL162726.2-201ENST00000438986 1017 ntBASIC17.05■□□□□ 0.32
CSPG5O95196 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.05■□□□□ 0.32
CSPG5O95196 AC108725.1-201ENST00000495472 409 ntBASIC17.05■□□□□ 0.32
CSPG5O95196 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.05■□□□□ 0.32
CSPG5O95196 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.05■□□□□ 0.32
CSPG5O95196 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.05■□□□□ 0.32
CSPG5O95196 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CSPG5O95196 MIR6869-201ENST00000619434 62 ntBASIC17.05■□□□□ 0.32
CSPG5O95196 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG5O95196 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG5O95196 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CSPG5O95196 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG5O95196 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.05■□□□□ 0.32
CSPG5O95196 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG5O95196 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CSPG5O95196 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSPG5O95196 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.05■□□□□ 0.32
CSPG5O95196 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.05■□□□□ 0.32
CSPG5O95196 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.05■□□□□ 0.32
CSPG5O95196 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.04■□□□□ 0.32
CSPG5O95196 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CSPG5O95196 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.04■□□□□ 0.32
CSPG5O95196 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.04■□□□□ 0.32
CSPG5O95196 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.04■□□□□ 0.32
CSPG5O95196 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CSPG5O95196 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 RNF216P1-203ENST00000404404 2427 ntBASIC17.04■□□□□ 0.32
CSPG5O95196 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.04■□□□□ 0.32
CSPG5O95196 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.04■□□□□ 0.32
CSPG5O95196 AL355994.2-201ENST00000447882 704 ntBASIC17.04■□□□□ 0.32
CSPG5O95196 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.04■□□□□ 0.32
CSPG5O95196 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.04■□□□□ 0.32
CSPG5O95196 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.04■□□□□ 0.32
CSPG5O95196 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.04■□□□□ 0.32
CSPG5O95196 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.04■□□□□ 0.32
CSPG5O95196 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.04■□□□□ 0.32
CSPG5O95196 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.04■□□□□ 0.32
CSPG5O95196 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 AL022328.1-201ENST00000610050 478 ntBASIC17.04■□□□□ 0.32
CSPG5O95196 AC009542.2-202ENST00000619004 1067 ntBASIC17.04■□□□□ 0.32
CSPG5O95196 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CSPG5O95196 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CSPG5O95196 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.04■□□□□ 0.32
CSPG5O95196 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CSPG5O95196 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CSPG5O95196 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CSPG5O95196 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG5O95196 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms