Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC005622.1-201ENST00000636801 1703 ntBASIC6.91□□□□□ -1.3
USH2AO75445 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC6.91□□□□□ -1.3
USH2AO75445 LETM1P2-201ENST00000597330 2178 ntBASIC6.91□□□□□ -1.3
USH2AO75445 PCDHB18P-201ENST00000524813 2368 ntBASIC6.91□□□□□ -1.3
USH2AO75445 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
USH2AO75445 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
USH2AO75445 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 AC067852.2-201ENST00000590513 2313 ntBASIC6.91□□□□□ -1.3
USH2AO75445 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC6.91□□□□□ -1.3
USH2AO75445 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
USH2AO75445 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
USH2AO75445 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC6.91□□□□□ -1.3
USH2AO75445 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 KRT17P4-201ENST00000429445 819 ntBASIC6.91□□□□□ -1.3
USH2AO75445 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
USH2AO75445 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC6.91□□□□□ -1.3
USH2AO75445 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC6.91□□□□□ -1.3
USH2AO75445 DIO1-215ENST00000610607 796 ntTSL 5 BASIC6.91□□□□□ -1.3
USH2AO75445 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
USH2AO75445 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 ABALON-201ENST00000629058 1903 ntBASIC6.9□□□□□ -1.3
USH2AO75445 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC6.9□□□□□ -1.3
USH2AO75445 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC6.9□□□□□ -1.3
USH2AO75445 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 TUBB8P8-201ENST00000458717 1058 ntBASIC6.9□□□□□ -1.3
USH2AO75445 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC6.9□□□□□ -1.3
USH2AO75445 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
USH2AO75445 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC6.9□□□□□ -1.3
USH2AO75445 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC6.9□□□□□ -1.3
USH2AO75445 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC6.9□□□□□ -1.3
USH2AO75445 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 RHBDF1P1-201ENST00000427504 1941 ntBASIC6.9□□□□□ -1.3
USH2AO75445 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC6.9□□□□□ -1.3
USH2AO75445 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC6.9□□□□□ -1.3
USH2AO75445 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC6.9□□□□□ -1.3
USH2AO75445 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC6.9□□□□□ -1.3
USH2AO75445 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC6.9□□□□□ -1.3
USH2AO75445 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC6.9□□□□□ -1.3
USH2AO75445 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC6.9□□□□□ -1.3
USH2AO75445 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 MCC-208ENST00000514701 2855 ntTSL 2 BASIC6.9□□□□□ -1.3
USH2AO75445 HCG27-204ENST00000424675 895 ntTSL 3 BASIC6.9□□□□□ -1.3
USH2AO75445 AL512306.1-201ENST00000432698 848 ntBASIC6.9□□□□□ -1.3
USH2AO75445 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC6.9□□□□□ -1.3
USH2AO75445 RN7SL258P-201ENST00000478664 300 ntBASIC6.9□□□□□ -1.3
USH2AO75445 RCC2P8-201ENST00000502779 1035 ntBASIC6.9□□□□□ -1.3
USH2AO75445 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC6.9□□□□□ -1.3
USH2AO75445 CTBP2P6-201ENST00000526402 1229 ntBASIC6.9□□□□□ -1.3
USH2AO75445 AC009779.1-201ENST00000551138 283 ntBASIC6.9□□□□□ -1.3
USH2AO75445 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC6.9□□□□□ -1.3
USH2AO75445 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
USH2AO75445 LINC00431-202ENST00000636375 159 ntBASIC6.9□□□□□ -1.3
USH2AO75445 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 AL603756.1-201ENST00000606511 2163 ntBASIC6.9□□□□□ -1.3
USH2AO75445 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
USH2AO75445 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
USH2AO75445 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
USH2AO75445 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC6.9□□□□□ -1.31
USH2AO75445 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
USH2AO75445 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
USH2AO75445 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
USH2AO75445 AP000356.3-201ENST00000382243 753 ntBASIC6.9□□□□□ -1.31
USH2AO75445 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
USH2AO75445 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC6.9□□□□□ -1.31
USH2AO75445 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
USH2AO75445 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
USH2AO75445 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
USH2AO75445 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC6.9□□□□□ -1.31
USH2AO75445 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
USH2AO75445 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC6.9□□□□□ -1.31
USH2AO75445 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
USH2AO75445 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC6.9□□□□□ -1.31
USH2AO75445 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
USH2AO75445 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.31
USH2AO75445 AC020931.1-201ENST00000589622 1346 ntBASIC6.9□□□□□ -1.31
USH2AO75445 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
USH2AO75445 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms