Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.19■□□□□ 0.02
LCMT2O60294 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.19■□□□□ 0.02
LCMT2O60294 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCMT2O60294 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
LCMT2O60294 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCMT2O60294 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCMT2O60294 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
LCMT2O60294 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCMT2O60294 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCMT2O60294 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCMT2O60294 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCMT2O60294 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.19■□□□□ 0.02
LCMT2O60294 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LCMT2O60294 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCMT2O60294 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LCMT2O60294 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.19■□□□□ 0.02
LCMT2O60294 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LCMT2O60294 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LCMT2O60294 AC092850.2-201ENST00000623821 2697 ntBASIC15.19■□□□□ 0.02
LCMT2O60294 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCMT2O60294 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.19■□□□□ 0.02
LCMT2O60294 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
LCMT2O60294 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.18■□□□□ 0.02
LCMT2O60294 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
LCMT2O60294 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.18■□□□□ 0.02
LCMT2O60294 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.18■□□□□ 0.02
LCMT2O60294 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.18■□□□□ 0.02
LCMT2O60294 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.18■□□□□ 0.02
LCMT2O60294 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 MRPS18AP1-201ENST00000414458 589 ntBASIC15.18■□□□□ 0.02
LCMT2O60294 AC074338.1-201ENST00000416825 156 ntBASIC15.18■□□□□ 0.02
LCMT2O60294 BASP1P1-201ENST00000430708 665 ntBASIC15.18■□□□□ 0.02
LCMT2O60294 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.18■□□□□ 0.02
LCMT2O60294 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.18■□□□□ 0.02
LCMT2O60294 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.18■□□□□ 0.02
LCMT2O60294 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.18■□□□□ 0.02
LCMT2O60294 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.18■□□□□ 0.02
LCMT2O60294 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.18■□□□□ 0.02
LCMT2O60294 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
LCMT2O60294 AL109936.8-201ENST00000641772 604 ntBASIC15.18■□□□□ 0.02
LCMT2O60294 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.18■□□□□ 0.02
LCMT2O60294 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LCMT2O60294 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
LCMT2O60294 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.18■□□□□ 0.02
LCMT2O60294 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.18■□□□□ 0.02
LCMT2O60294 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LCMT2O60294 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCMT2O60294 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.17■□□□□ 0.02
LCMT2O60294 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LCMT2O60294 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.17■□□□□ 0.02
LCMT2O60294 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LCMT2O60294 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LCMT2O60294 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LCMT2O60294 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LCMT2O60294 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.17■□□□□ 0.02
LCMT2O60294 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LCMT2O60294 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.17■□□□□ 0.02
LCMT2O60294 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.17■□□□□ 0.02
LCMT2O60294 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LCMT2O60294 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LCMT2O60294 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LCMT2O60294 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.17■□□□□ 0.02
LCMT2O60294 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LCMT2O60294 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LCMT2O60294 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LCMT2O60294 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.17■□□□□ 0.02
LCMT2O60294 AL512638.1-201ENST00000457493 794 ntBASIC15.17■□□□□ 0.02
LCMT2O60294 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LCMT2O60294 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.17■□□□□ 0.02
LCMT2O60294 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.17■□□□□ 0.02
LCMT2O60294 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.17■□□□□ 0.02
LCMT2O60294 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.17■□□□□ 0.02
LCMT2O60294 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.17■□□□□ 0.02
LCMT2O60294 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LCMT2O60294 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LCMT2O60294 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LCMT2O60294 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LCMT2O60294 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LCMT2O60294 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LCMT2O60294 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms