Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.03□□□□□ -0.32
SSSCA1O60232 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SSSCA1O60232 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.03□□□□□ -0.32
SSSCA1O60232 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.03□□□□□ -0.32
SSSCA1O60232 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SSSCA1O60232 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
SSSCA1O60232 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
SSSCA1O60232 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.03□□□□□ -0.32
SSSCA1O60232 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.03□□□□□ -0.32
SSSCA1O60232 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
SSSCA1O60232 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SSSCA1O60232 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.03□□□□□ -0.32
SSSCA1O60232 AC245100.5-201ENST00000452108 331 ntBASIC13.03□□□□□ -0.32
SSSCA1O60232 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
SSSCA1O60232 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.03□□□□□ -0.32
SSSCA1O60232 FAM86EP-206ENST00000510506 987 ntBASIC13.03□□□□□ -0.32
SSSCA1O60232 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.03□□□□□ -0.32
SSSCA1O60232 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.03□□□□□ -0.32
SSSCA1O60232 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.03□□□□□ -0.32
SSSCA1O60232 RN7SL850P-201ENST00000579959 291 ntBASIC13.03□□□□□ -0.32
SSSCA1O60232 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
SSSCA1O60232 MTDHP4-201ENST00000600287 670 ntBASIC13.03□□□□□ -0.32
SSSCA1O60232 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SSSCA1O60232 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 AC126335.2-201ENST00000623362 4637 ntBASIC13.03□□□□□ -0.32
SSSCA1O60232 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SSSCA1O60232 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.03□□□□□ -0.32
SSSCA1O60232 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SSSCA1O60232 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
SSSCA1O60232 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 AL390755.1-201ENST00000623716 2027 ntBASIC13.03□□□□□ -0.32
SSSCA1O60232 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SSSCA1O60232 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SSSCA1O60232 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.03□□□□□ -0.32
SSSCA1O60232 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.03□□□□□ -0.32
SSSCA1O60232 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.03□□□□□ -0.32
SSSCA1O60232 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
SSSCA1O60232 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
SSSCA1O60232 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SSSCA1O60232 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
SSSCA1O60232 AC009090.5-201ENST00000624886 2285 ntBASIC13.02□□□□□ -0.32
SSSCA1O60232 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SSSCA1O60232 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
SSSCA1O60232 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SSSCA1O60232 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.02□□□□□ -0.32
SSSCA1O60232 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.02□□□□□ -0.32
SSSCA1O60232 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.02□□□□□ -0.32
SSSCA1O60232 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SSSCA1O60232 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSSCA1O60232 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.33
SSSCA1O60232 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.02□□□□□ -0.33
SSSCA1O60232 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.02□□□□□ -0.33
SSSCA1O60232 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSSCA1O60232 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSSCA1O60232 KRT16P4-201ENST00000453883 522 ntBASIC13.02□□□□□ -0.33
SSSCA1O60232 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SSSCA1O60232 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSSCA1O60232 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.02□□□□□ -0.33
SSSCA1O60232 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.02□□□□□ -0.33
SSSCA1O60232 MTDHP3-201ENST00000594186 672 ntBASIC13.02□□□□□ -0.33
SSSCA1O60232 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.02□□□□□ -0.33
SSSCA1O60232 GGTLC5P-201ENST00000617623 998 ntBASIC13.02□□□□□ -0.33
SSSCA1O60232 AC116407.4-201ENST00000623319 1061 ntBASIC13.02□□□□□ -0.33
SSSCA1O60232 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SSSCA1O60232 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SSSCA1O60232 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSSCA1O60232 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.02□□□□□ -0.33
SSSCA1O60232 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSSCA1O60232 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSSCA1O60232 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSSCA1O60232 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSSCA1O60232 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSSCA1O60232 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.02□□□□□ -0.33
SSSCA1O60232 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSSCA1O60232 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.02□□□□□ -0.33
SSSCA1O60232 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSSCA1O60232 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSSCA1O60232 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSSCA1O60232 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.02□□□□□ -0.33
SSSCA1O60232 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSSCA1O60232 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSSCA1O60232 AC104581.4-201ENST00000623126 3052 ntBASIC13.02□□□□□ -0.33
SSSCA1O60232 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms