Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX1O43812 PCDHA14-201ENST00000506751 2298 ntBASIC15.15■□□□□ 0.02
DUX1O43812 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.15■□□□□ 0.02
DUX1O43812 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
DUX1O43812 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX1O43812 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX1O43812 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.15■□□□□ 0.02
DUX1O43812 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX1O43812 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
DUX1O43812 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX1O43812 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX1O43812 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX1O43812 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX1O43812 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX1O43812 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX1O43812 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX1O43812 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.15■□□□□ 0.02
DUX1O43812 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX1O43812 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.15■□□□□ 0.02
DUX1O43812 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.15■□□□□ 0.02
DUX1O43812 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.15■□□□□ 0.02
DUX1O43812 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.15■□□□□ 0.02
DUX1O43812 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.15■□□□□ 0.02
DUX1O43812 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.15■□□□□ 0.02
DUX1O43812 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.15■□□□□ 0.02
DUX1O43812 AL121723.1-201ENST00000445194 1519 ntBASIC15.15■□□□□ 0.02
DUX1O43812 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX1O43812 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
DUX1O43812 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
DUX1O43812 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX1O43812 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.15■□□□□ 0.02
DUX1O43812 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX1O43812 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX1O43812 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
DUX1O43812 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX1O43812 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX1O43812 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX1O43812 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.15■□□□□ 0.02
DUX1O43812 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.15■□□□□ 0.02
DUX1O43812 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.15■□□□□ 0.02
DUX1O43812 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.15■□□□□ 0.02
DUX1O43812 AL596087.1-201ENST00000400979 1969 ntBASIC15.15■□□□□ 0.02
DUX1O43812 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.15■□□□□ 0.02
DUX1O43812 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DUX1O43812 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX1O43812 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DUX1O43812 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.14■□□□□ 0.01
DUX1O43812 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX1O43812 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX1O43812 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DUX1O43812 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DUX1O43812 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX1O43812 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
DUX1O43812 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DUX1O43812 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DUX1O43812 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
DUX1O43812 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
DUX1O43812 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX1O43812 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX1O43812 C1QBPP1-201ENST00000400117 770 ntBASIC15.14■□□□□ 0.01
DUX1O43812 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX1O43812 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.14■□□□□ 0.01
DUX1O43812 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
DUX1O43812 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.14■□□□□ 0.01
DUX1O43812 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX1O43812 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
DUX1O43812 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.14■□□□□ 0.01
DUX1O43812 TDH-203ENST00000531764 1110 ntBASIC15.14■□□□□ 0.01
DUX1O43812 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.14■□□□□ 0.01
DUX1O43812 AC120045.2-201ENST00000567334 178 ntBASIC15.14■□□□□ 0.01
DUX1O43812 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.14■□□□□ 0.01
DUX1O43812 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.14■□□□□ 0.01
DUX1O43812 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.14■□□□□ 0.01
DUX1O43812 AC233724.13-201ENST00000598383 410 ntBASIC15.14■□□□□ 0.01
DUX1O43812 AC000095.1-201ENST00000603208 874 ntBASIC15.14■□□□□ 0.01
DUX1O43812 AL512343.1-201ENST00000605837 169 ntBASIC15.14■□□□□ 0.01
DUX1O43812 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DUX1O43812 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX1O43812 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
DUX1O43812 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
DUX1O43812 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.14■□□□□ 0.01
DUX1O43812 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
DUX1O43812 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX1O43812 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
DUX1O43812 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.14■□□□□ 0.01
DUX1O43812 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.14■□□□□ 0.01
DUX1O43812 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX1O43812 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.14■□□□□ 0.01
DUX1O43812 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DUX1O43812 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.14■□□□□ 0.01
DUX1O43812 AC018892.3-201ENST00000623986 2499 ntBASIC15.14■□□□□ 0.01
DUX1O43812 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.14■□□□□ 0.01
DUX1O43812 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.13■□□□□ 0.01
DUX1O43812 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
DUX1O43812 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
DUX1O43812 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.13■□□□□ 0.01
DUX1O43812 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
DUX1O43812 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms