Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIPK2O43353 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RIPK2O43353 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIPK2O43353 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIPK2O43353 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIPK2O43353 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RIPK2O43353 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RIPK2O43353 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.15■□□□□ 0.18
RIPK2O43353 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RIPK2O43353 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIPK2O43353 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.15■□□□□ 0.18
RIPK2O43353 AC108751.1-201ENST00000490852 363 ntBASIC16.15■□□□□ 0.18
RIPK2O43353 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RIPK2O43353 KRT18P35-201ENST00000510488 1269 ntBASIC16.15■□□□□ 0.18
RIPK2O43353 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RIPK2O43353 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.15■□□□□ 0.18
RIPK2O43353 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.15■□□□□ 0.18
RIPK2O43353 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIPK2O43353 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIPK2O43353 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RIPK2O43353 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIPK2O43353 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RIPK2O43353 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.15■□□□□ 0.18
RIPK2O43353 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIPK2O43353 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RIPK2O43353 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.15■□□□□ 0.18
RIPK2O43353 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIPK2O43353 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIPK2O43353 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIPK2O43353 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIPK2O43353 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIPK2O43353 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
RIPK2O43353 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
RIPK2O43353 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RIPK2O43353 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
RIPK2O43353 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.14■□□□□ 0.18
RIPK2O43353 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
RIPK2O43353 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RIPK2O43353 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RIPK2O43353 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RIPK2O43353 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RIPK2O43353 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIPK2O43353 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RIPK2O43353 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIPK2O43353 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RIPK2O43353 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RIPK2O43353 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RIPK2O43353 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIPK2O43353 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.14■□□□□ 0.17
RIPK2O43353 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RIPK2O43353 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.14■□□□□ 0.17
RIPK2O43353 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.14■□□□□ 0.17
RIPK2O43353 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RIPK2O43353 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.14■□□□□ 0.17
RIPK2O43353 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.14■□□□□ 0.17
RIPK2O43353 VN2R19P-201ENST00000442399 1052 ntBASIC16.14■□□□□ 0.17
RIPK2O43353 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
RIPK2O43353 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RIPK2O43353 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.14■□□□□ 0.17
RIPK2O43353 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.14■□□□□ 0.17
RIPK2O43353 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.14■□□□□ 0.17
RIPK2O43353 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.14■□□□□ 0.17
RIPK2O43353 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIPK2O43353 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.14■□□□□ 0.17
RIPK2O43353 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RIPK2O43353 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIPK2O43353 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.14■□□□□ 0.17
RIPK2O43353 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIPK2O43353 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIPK2O43353 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIPK2O43353 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIPK2O43353 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.14■□□□□ 0.17
RIPK2O43353 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIPK2O43353 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIPK2O43353 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RIPK2O43353 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIPK2O43353 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIPK2O43353 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIPK2O43353 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RIPK2O43353 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.13■□□□□ 0.17
RIPK2O43353 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.13■□□□□ 0.17
RIPK2O43353 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.13■□□□□ 0.17
RIPK2O43353 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIPK2O43353 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIPK2O43353 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.13■□□□□ 0.17
RIPK2O43353 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.13■□□□□ 0.17
RIPK2O43353 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RIPK2O43353 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.13■□□□□ 0.17
RIPK2O43353 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.13■□□□□ 0.17
RIPK2O43353 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIPK2O43353 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIPK2O43353 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIPK2O43353 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.13■□□□□ 0.17
RIPK2O43353 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIPK2O43353 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.13■□□□□ 0.17
RIPK2O43353 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.13■□□□□ 0.17
RIPK2O43353 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.13■□□□□ 0.17
RIPK2O43353 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.13■□□□□ 0.17
RIPK2O43353 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.13■□□□□ 0.17
RIPK2O43353 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms