Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSI1O43347 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSI1O43347 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.47■□□□□ 0.23
MSI1O43347 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.47■□□□□ 0.23
MSI1O43347 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.47■□□□□ 0.23
MSI1O43347 AC023310.3-201ENST00000557027 670 ntBASIC16.47■□□□□ 0.23
MSI1O43347 AC100756.1-201ENST00000562736 682 ntBASIC16.47■□□□□ 0.23
MSI1O43347 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.47■□□□□ 0.23
MSI1O43347 AC138749.3-201ENST00000567691 622 ntBASIC16.47■□□□□ 0.23
MSI1O43347 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
MSI1O43347 MIR4313-201ENST00000580760 101 ntBASIC16.47■□□□□ 0.23
MSI1O43347 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.47■□□□□ 0.23
MSI1O43347 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSI1O43347 AC116165.1-201ENST00000611806 668 ntBASIC16.47■□□□□ 0.23
MSI1O43347 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.47■□□□□ 0.23
MSI1O43347 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
MSI1O43347 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
MSI1O43347 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.47■□□□□ 0.23
MSI1O43347 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSI1O43347 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
MSI1O43347 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSI1O43347 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSI1O43347 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSI1O43347 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MSI1O43347 AC007541.1-201ENST00000570282 1469 ntBASIC16.47■□□□□ 0.23
MSI1O43347 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSI1O43347 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MSI1O43347 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.47■□□□□ 0.23
MSI1O43347 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MSI1O43347 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.47■□□□□ 0.23
MSI1O43347 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.46■□□□□ 0.23
MSI1O43347 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
MSI1O43347 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSI1O43347 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSI1O43347 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.46■□□□□ 0.23
MSI1O43347 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSI1O43347 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSI1O43347 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSI1O43347 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSI1O43347 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSI1O43347 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
MSI1O43347 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MSI1O43347 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MSI1O43347 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.46■□□□□ 0.23
MSI1O43347 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.46■□□□□ 0.23
MSI1O43347 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.46■□□□□ 0.23
MSI1O43347 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MSI1O43347 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSI1O43347 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
MSI1O43347 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.46■□□□□ 0.23
MSI1O43347 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.46■□□□□ 0.23
MSI1O43347 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSI1O43347 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
MSI1O43347 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.46■□□□□ 0.23
MSI1O43347 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.46■□□□□ 0.23
MSI1O43347 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.46■□□□□ 0.23
MSI1O43347 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
MSI1O43347 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.46■□□□□ 0.23
MSI1O43347 AC092337.1-201ENST00000568699 1129 ntBASIC16.46■□□□□ 0.23
MSI1O43347 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.46■□□□□ 0.23
MSI1O43347 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MSI1O43347 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.46■□□□□ 0.23
MSI1O43347 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MSI1O43347 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
MSI1O43347 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSI1O43347 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSI1O43347 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.46■□□□□ 0.23
MSI1O43347 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.46■□□□□ 0.23
MSI1O43347 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MSI1O43347 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSI1O43347 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.46■□□□□ 0.23
MSI1O43347 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSI1O43347 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
MSI1O43347 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.46■□□□□ 0.22
MSI1O43347 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.46■□□□□ 0.22
MSI1O43347 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
MSI1O43347 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
MSI1O43347 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MSI1O43347 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.45■□□□□ 0.22
MSI1O43347 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.45■□□□□ 0.22
MSI1O43347 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MSI1O43347 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MSI1O43347 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.45■□□□□ 0.22
MSI1O43347 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MSI1O43347 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MSI1O43347 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MSI1O43347 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MSI1O43347 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
MSI1O43347 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.45■□□□□ 0.22
MSI1O43347 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MSI1O43347 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MSI1O43347 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
MSI1O43347 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
MSI1O43347 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
MSI1O43347 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.45■□□□□ 0.22
MSI1O43347 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.45■□□□□ 0.22
MSI1O43347 PIN1P1-201ENST00000412108 996 ntBASIC16.45■□□□□ 0.22
MSI1O43347 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.45■□□□□ 0.22
MSI1O43347 CRB3P1-201ENST00000449338 276 ntBASIC16.45■□□□□ 0.22
MSI1O43347 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms