Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
FOXN3O00409 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXN3O00409 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXN3O00409 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXN3O00409 IMPDH1P4-201ENST00000445028 1534 ntBASIC17■□□□□ 0.31
FOXN3O00409 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXN3O00409 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXN3O00409 AL035456.1-201ENST00000456064 1369 ntBASIC17■□□□□ 0.31
FOXN3O00409 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXN3O00409 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXN3O00409 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17■□□□□ 0.31
FOXN3O00409 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
FOXN3O00409 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17■□□□□ 0.31
FOXN3O00409 AC138035.3-201ENST00000622706 2791 ntBASIC17■□□□□ 0.31
FOXN3O00409 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXN3O00409 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXN3O00409 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXN3O00409 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXN3O00409 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXN3O00409 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXN3O00409 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXN3O00409 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXN3O00409 AL109954.1-202ENST00000564051 2148 ntBASIC16.99■□□□□ 0.31
FOXN3O00409 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXN3O00409 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXN3O00409 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXN3O00409 AL139400.1-201ENST00000366220 510 ntBASIC16.99■□□□□ 0.31
FOXN3O00409 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXN3O00409 FO393414.2-201ENST00000405153 598 ntBASIC16.99■□□□□ 0.31
FOXN3O00409 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXN3O00409 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.99■□□□□ 0.31
FOXN3O00409 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXN3O00409 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXN3O00409 AC109322.1-201ENST00000524499 1264 ntBASIC16.99■□□□□ 0.31
FOXN3O00409 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
FOXN3O00409 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.99■□□□□ 0.31
FOXN3O00409 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXN3O00409 LINC00628-201ENST00000628516 1289 ntBASIC16.99■□□□□ 0.31
FOXN3O00409 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXN3O00409 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXN3O00409 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXN3O00409 AC006486.2-201ENST00000624246 2199 ntBASIC16.99■□□□□ 0.31
FOXN3O00409 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXN3O00409 KRT8P12-202ENST00000472924 1397 ntBASIC16.99■□□□□ 0.31
FOXN3O00409 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXN3O00409 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXN3O00409 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXN3O00409 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXN3O00409 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXN3O00409 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXN3O00409 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXN3O00409 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXN3O00409 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXN3O00409 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.98■□□□□ 0.31
FOXN3O00409 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
FOXN3O00409 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXN3O00409 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
FOXN3O00409 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.98■□□□□ 0.31
FOXN3O00409 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXN3O00409 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXN3O00409 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.98■□□□□ 0.31
FOXN3O00409 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXN3O00409 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXN3O00409 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
FOXN3O00409 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXN3O00409 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXN3O00409 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXN3O00409 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.98■□□□□ 0.31
FOXN3O00409 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXN3O00409 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.98■□□□□ 0.31
FOXN3O00409 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FOXN3O00409 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
FOXN3O00409 AC069262.1-201ENST00000539058 672 ntBASIC16.98■□□□□ 0.31
FOXN3O00409 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.98■□□□□ 0.31
FOXN3O00409 AL079307.3-201ENST00000556114 283 ntBASIC16.98■□□□□ 0.31
FOXN3O00409 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXN3O00409 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.98■□□□□ 0.31
FOXN3O00409 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
FOXN3O00409 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.98■□□□□ 0.31
FOXN3O00409 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXN3O00409 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXN3O00409 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXN3O00409 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXN3O00409 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXN3O00409 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
FOXN3O00409 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXN3O00409 AP002414.2-201ENST00000591780 3365 ntBASIC16.98■□□□□ 0.31
FOXN3O00409 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.98■□□□□ 0.31
FOXN3O00409 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXN3O00409 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
FOXN3O00409 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXN3O00409 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXN3O00409 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXN3O00409 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.97■□□□□ 0.31
FOXN3O00409 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXN3O00409 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
FOXN3O00409 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXN3O00409 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms