Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC188H7C350 AC010507.1-201ENST00000633895 436 ntBASIC16.55■□□□□ 0.24
CCDC188H7C350 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC188H7C350 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC188H7C350 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
CCDC188H7C350 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC188H7C350 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC188H7C350 FLJ16779-201ENST00000612722 7638 ntBASIC16.55■□□□□ 0.24
CCDC188H7C350 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC188H7C350 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC188H7C350 SNX18-202ENST00000343017 3140 ntBASIC16.55■□□□□ 0.24
CCDC188H7C350 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC188H7C350 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC188H7C350 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC188H7C350 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC188H7C350 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC188H7C350 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CCDC188H7C350 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC188H7C350 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC188H7C350 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC188H7C350 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC188H7C350 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC188H7C350 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC188H7C350 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC188H7C350 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
CCDC188H7C350 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC188H7C350 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC188H7C350 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC188H7C350 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC188H7C350 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC188H7C350 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CCDC188H7C350 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC188H7C350 GRK6P1-201ENST00000400595 1711 ntBASIC16.54■□□□□ 0.24
CCDC188H7C350 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC188H7C350 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC188H7C350 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC188H7C350 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC188H7C350 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC188H7C350 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC188H7C350 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC188H7C350 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC188H7C350 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC188H7C350 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC188H7C350 AC004987.2-201ENST00000395959 1148 ntBASIC16.54■□□□□ 0.24
CCDC188H7C350 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC188H7C350 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC188H7C350 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC188H7C350 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CCDC188H7C350 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC188H7C350 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC188H7C350 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CCDC188H7C350 AC023141.13-201ENST00000604991 943 ntBASIC16.54■□□□□ 0.24
CCDC188H7C350 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
CCDC188H7C350 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC188H7C350 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.54■□□□□ 0.24
CCDC188H7C350 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CCDC188H7C350 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC188H7C350 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC188H7C350 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CCDC188H7C350 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC188H7C350 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CCDC188H7C350 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC188H7C350 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC188H7C350 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CCDC188H7C350 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC188H7C350 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC188H7C350 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC188H7C350 ZBED1P1-201ENST00000502364 1930 ntBASIC16.53■□□□□ 0.24
CCDC188H7C350 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC188H7C350 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC188H7C350 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC188H7C350 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC188H7C350 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC188H7C350 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC188H7C350 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC188H7C350 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC188H7C350 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC188H7C350 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC188H7C350 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC188H7C350 AC092910.1-201ENST00000482027 1129 ntBASIC16.53■□□□□ 0.24
CCDC188H7C350 AC098859.1-201ENST00000502915 1238 ntBASIC16.53■□□□□ 0.24
CCDC188H7C350 UNC93B6-202ENST00000528242 690 ntBASIC16.53■□□□□ 0.24
CCDC188H7C350 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC188H7C350 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC188H7C350 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC188H7C350 AL445228.2-201ENST00000605589 952 ntBASIC16.53■□□□□ 0.24
CCDC188H7C350 AL161645.1-201ENST00000622716 1255 ntBASIC16.53■□□□□ 0.24
CCDC188H7C350 FAM215A-202ENST00000632077 792 ntBASIC16.53■□□□□ 0.24
CCDC188H7C350 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CCDC188H7C350 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC188H7C350 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CCDC188H7C350 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CCDC188H7C350 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CCDC188H7C350 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC188H7C350 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC188H7C350 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC188H7C350 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC188H7C350 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC188H7C350 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC188H7C350 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms