Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC196A0A1B0GTZ2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC196A0A1B0GTZ2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC196A0A1B0GTZ2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC196A0A1B0GTZ2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC196A0A1B0GTZ2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC196A0A1B0GTZ2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC196A0A1B0GTZ2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC055876.3-201ENST00000431496 288 ntBASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC241585.1-201ENST00000433527 519 ntBASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 IGHV3-42-201ENST00000520410 361 ntBASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 ZNF890P-202ENST00000530367 1156 ntBASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC138649.4-201ENST00000612222 287 ntBASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 AL590560.3-201ENST00000623350 461 ntBASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC100757.3-201ENST00000622361 1406 ntBASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 AL607033.1-201ENST00000623900 1599 ntBASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 Z97205.2-201ENST00000564697 1639 ntBASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC196A0A1B0GTZ2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 SDHAP3-202ENST00000515467 728 ntBASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 RFPL4AP1-201ENST00000530883 850 ntBASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 AL512361.1-201ENST00000554200 418 ntBASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC010336.2-201ENST00000564226 506 ntBASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC106028.4-201ENST00000614509 607 ntBASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC093512.1-201ENST00000617969 520 ntBASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms