Protein–RNA interactions for Protein: A0A183

LCE6A, Late cornified envelope protein 6A, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE6AA0A183 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCE6AA0A183 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCE6AA0A183 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCE6AA0A183 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC10.79□□□□□ -0.68
LCE6AA0A183 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCE6AA0A183 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC10.79□□□□□ -0.68
LCE6AA0A183 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
LCE6AA0A183 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC10.78□□□□□ -0.68
LCE6AA0A183 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
LCE6AA0A183 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
LCE6AA0A183 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC10.78□□□□□ -0.68
LCE6AA0A183 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC10.78□□□□□ -0.68
LCE6AA0A183 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
LCE6AA0A183 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC10.78□□□□□ -0.68
LCE6AA0A183 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC10.78□□□□□ -0.68
LCE6AA0A183 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC10.78□□□□□ -0.68
LCE6AA0A183 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC10.78□□□□□ -0.68
LCE6AA0A183 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
LCE6AA0A183 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC10.78□□□□□ -0.68
LCE6AA0A183 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC10.78□□□□□ -0.68
LCE6AA0A183 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
LCE6AA0A183 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
LCE6AA0A183 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
LCE6AA0A183 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
LCE6AA0A183 CRCP-204ENST00000398684 492 ntTSL 2 BASIC10.78□□□□□ -0.68
LCE6AA0A183 MPV17-205ENST00000402310 906 ntTSL 5 BASIC10.78□□□□□ -0.68
LCE6AA0A183 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 AL627389.1-201ENST00000413508 1182 ntBASIC10.78□□□□□ -0.68
LCE6AA0A183 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 PARVG-202ENST00000415224 999 ntTSL 2 BASIC10.78□□□□□ -0.68
LCE6AA0A183 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC10.78□□□□□ -0.68
LCE6AA0A183 AC011742.3-201ENST00000439053 820 ntBASIC10.78□□□□□ -0.68
LCE6AA0A183 CNN2P10-201ENST00000443067 918 ntBASIC10.78□□□□□ -0.68
LCE6AA0A183 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC10.78□□□□□ -0.68
LCE6AA0A183 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 RN7SL181P-201ENST00000462921 277 ntBASIC10.78□□□□□ -0.68
LCE6AA0A183 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 CFL1-206ENST00000527344 962 ntTSL 2 BASIC10.78□□□□□ -0.68
LCE6AA0A183 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC10.78□□□□□ -0.68
LCE6AA0A183 MIR4321-201ENST00000592276 80 ntBASIC10.78□□□□□ -0.68
LCE6AA0A183 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC10.78□□□□□ -0.68
LCE6AA0A183 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC10.78□□□□□ -0.68
LCE6AA0A183 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC10.78□□□□□ -0.68
LCE6AA0A183 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 AL138709.1-201ENST00000614840 1693 ntBASIC10.78□□□□□ -0.68
LCE6AA0A183 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC10.78□□□□□ -0.68
LCE6AA0A183 ZBTB45P2-201ENST00000452245 1531 ntBASIC10.78□□□□□ -0.68
LCE6AA0A183 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC10.78□□□□□ -0.68
LCE6AA0A183 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
LCE6AA0A183 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC10.78□□□□□ -0.68
LCE6AA0A183 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC10.78□□□□□ -0.68
LCE6AA0A183 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC10.78□□□□□ -0.68
LCE6AA0A183 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
LCE6AA0A183 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCE6AA0A183 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
LCE6AA0A183 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LCE6AA0A183 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
LCE6AA0A183 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LCE6AA0A183 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
LCE6AA0A183 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
LCE6AA0A183 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC10.77□□□□□ -0.68
LCE6AA0A183 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
LCE6AA0A183 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
LCE6AA0A183 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
LCE6AA0A183 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LCE6AA0A183 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LCE6AA0A183 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
LCE6AA0A183 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
LCE6AA0A183 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LCE6AA0A183 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC10.77□□□□□ -0.69
LCE6AA0A183 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC10.77□□□□□ -0.69
LCE6AA0A183 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
LCE6AA0A183 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LCE6AA0A183 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms