Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 TMBIM7P-203ENST00000641617 1718 ntBASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 AC020658.6-201ENST00000623564 1870 ntBASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF103-CHMP3A0A140T963 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 AC106881.1-201ENST00000605849 3329 ntBASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 RHOQP3-201ENST00000437982 621 ntBASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 AC009078.2-202ENST00000463353 338 ntBASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 AC109635.5-201ENST00000533593 962 ntBASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 AL009183.1-201ENST00000603760 355 ntBASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 AC023141.13-201ENST00000604991 943 ntBASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 AC067750.1-201ENST00000608826 6545 ntBASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF103-CHMP3A0A140T963 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms