Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 AC007389.4-201ENST00000454674 793 ntBASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 AL162274.1-201ENST00000617191 1098 ntBASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 AC006449.6-201ENST00000612330 2296 ntBASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.34■□□□□ 0.53
CTDP1Q9Y5B0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CTDP1Q9Y5B0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CTDP1Q9Y5B0 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CTDP1Q9Y5B0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.33■□□□□ 0.53
CTDP1Q9Y5B0 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.53
CTDP1Q9Y5B0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.33■□□□□ 0.53
CTDP1Q9Y5B0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CTDP1Q9Y5B0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.33■□□□□ 0.53
CTDP1Q9Y5B0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 CDC14C-201ENST00000428251 1719 ntBASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 KRT17P8-201ENST00000540749 863 ntBASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 AC092552.1-201ENST00000547243 906 ntBASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 MIR6752-201ENST00000618442 71 ntBASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 REXO1L1P-202ENST00000608646 1974 ntBASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.33■□□□□ 0.52
CTDP1Q9Y5B0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 RPL13P2-201ENST00000440687 659 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms