Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 PGAM5P1-201ENST00000518923 814 ntBASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 AC092902.6-201ENST00000641783 218 ntBASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 TMBIM7P-203ENST00000641617 1718 ntBASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RHBDD3Q9Y3P4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 AKAP8P1-201ENST00000434743 1349 ntBASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 TFAMP1-201ENST00000412727 736 ntBASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 AL355306.1-201ENST00000415580 579 ntBASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 AL135744.1-201ENST00000565098 629 ntBASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 AL365330.1-201ENST00000607459 531 ntBASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 AL109954.1-202ENST00000564051 2148 ntBASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.97□□□□□ -0.17
RHBDD3Q9Y3P4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.96□□□□□ -0.17
RHBDD3Q9Y3P4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms