Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
POLR1DQ9Y2S0 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
POLR1DQ9Y2S0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.28□□□□□ -0.12
POLR1DQ9Y2S0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
POLR1DQ9Y2S0 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
POLR1DQ9Y2S0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
POLR1DQ9Y2S0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
POLR1DQ9Y2S0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
POLR1DQ9Y2S0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.27□□□□□ -0.12
POLR1DQ9Y2S0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
POLR1DQ9Y2S0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
POLR1DQ9Y2S0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
POLR1DQ9Y2S0 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
POLR1DQ9Y2S0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
POLR1DQ9Y2S0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
POLR1DQ9Y2S0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
POLR1DQ9Y2S0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
POLR1DQ9Y2S0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
POLR1DQ9Y2S0 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.27□□□□□ -0.12
POLR1DQ9Y2S0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.27□□□□□ -0.12
POLR1DQ9Y2S0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.27□□□□□ -0.12
POLR1DQ9Y2S0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
POLR1DQ9Y2S0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 YBX2P1-201ENST00000394192 760 ntBASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 AC098859.1-201ENST00000502915 1238 ntBASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 RNA5SP410-201ENST00000516285 106 ntBASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 AC027307.2-201ENST00000591252 911 ntBASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR1DQ9Y2S0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 AP001282.1-201ENST00000531301 1499 ntBASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 TIMM8BP1-201ENST00000452384 211 ntBASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 SPTSSB-204ENST00000617024 1292 ntBASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 AC008267.7-201ENST00000624570 1194 ntBASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
POLR1DQ9Y2S0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms