Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA1Q9UND3 NME2P1-201ENST00000426182 414 ntBASIC14.71□□□□□ -0.05
NPIPA1Q9UND3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA1Q9UND3 GNAQP1-201ENST00000444815 1067 ntBASIC14.71□□□□□ -0.05
NPIPA1Q9UND3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.71□□□□□ -0.05
NPIPA1Q9UND3 CR383656.12-201ENST00000549567 513 ntBASIC14.71□□□□□ -0.05
NPIPA1Q9UND3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.71□□□□□ -0.05
NPIPA1Q9UND3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.71□□□□□ -0.05
NPIPA1Q9UND3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.71□□□□□ -0.05
NPIPA1Q9UND3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
NPIPA1Q9UND3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA1Q9UND3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.71□□□□□ -0.05
NPIPA1Q9UND3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.71□□□□□ -0.05
NPIPA1Q9UND3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA1Q9UND3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
NPIPA1Q9UND3 U82695.1-201ENST00000635752 1889 ntBASIC14.71□□□□□ -0.05
NPIPA1Q9UND3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA1Q9UND3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NPIPA1Q9UND3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
NPIPA1Q9UND3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
NPIPA1Q9UND3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.71□□□□□ -0.06
NPIPA1Q9UND3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NPIPA1Q9UND3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
NPIPA1Q9UND3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NPIPA1Q9UND3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
NPIPA1Q9UND3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NPIPA1Q9UND3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
NPIPA1Q9UND3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 AL353779.1-201ENST00000434793 351 ntBASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 KRT17P7-201ENST00000451704 1104 ntBASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 SERBP1P3-201ENST00000459980 809 ntBASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 AC104794.3-201ENST00000566840 1248 ntBASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA1Q9UND3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA1Q9UND3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.69□□□□□ -0.06
NPIPA1Q9UND3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA1Q9UND3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA1Q9UND3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.69□□□□□ -0.06
NPIPA1Q9UND3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA1Q9UND3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA1Q9UND3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.69□□□□□ -0.06
NPIPA1Q9UND3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.69□□□□□ -0.06
NPIPA1Q9UND3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
NPIPA1Q9UND3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA1Q9UND3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA1Q9UND3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA1Q9UND3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA1Q9UND3 COX5BP8-201ENST00000416911 349 ntBASIC14.69□□□□□ -0.06
NPIPA1Q9UND3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.69□□□□□ -0.06
NPIPA1Q9UND3 AL512361.1-201ENST00000554200 418 ntBASIC14.69□□□□□ -0.06
NPIPA1Q9UND3 AC044860.1-202ENST00000559481 777 ntBASIC14.69□□□□□ -0.06
NPIPA1Q9UND3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms