Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PNMA3Q9UL41 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PNMA3Q9UL41 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PNMA3Q9UL41 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.21■□□□□ 0.51
PNMA3Q9UL41 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.21■□□□□ 0.51
PNMA3Q9UL41 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PNMA3Q9UL41 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.21■□□□□ 0.51
PNMA3Q9UL41 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PNMA3Q9UL41 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
PNMA3Q9UL41 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 AL121723.1-201ENST00000445194 1519 ntBASIC18.2■□□□□ 0.5
PNMA3Q9UL41 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 MIR1247-201ENST00000408206 136 ntBASIC18.2■□□□□ 0.5
PNMA3Q9UL41 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 RPL13AP20-201ENST00000459725 609 ntBASIC18.2■□□□□ 0.5
PNMA3Q9UL41 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 AC023310.1-201ENST00000554836 735 ntBASIC18.2■□□□□ 0.5
PNMA3Q9UL41 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 AC093813.1-201ENST00000605066 256 ntBASIC18.2■□□□□ 0.5
PNMA3Q9UL41 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PNMA3Q9UL41 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 GPAA1P2-201ENST00000417923 928 ntBASIC18.19■□□□□ 0.5
PNMA3Q9UL41 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 AC026410.3-201ENST00000514280 936 ntBASIC18.19■□□□□ 0.5
PNMA3Q9UL41 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.19■□□□□ 0.5
PNMA3Q9UL41 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 AC091271.1-201ENST00000611877 1162 ntBASIC18.19■□□□□ 0.5
PNMA3Q9UL41 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.19■□□□□ 0.5
PNMA3Q9UL41 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
PNMA3Q9UL41 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PNMA3Q9UL41 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms