Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 KRT8P44-201ENST00000441609 1350 ntBASIC15.81■□□□□ 0.12
TREX1Q9NSU2 TARDBPP1-201ENST00000442013 1203 ntBASIC15.81■□□□□ 0.12
TREX1Q9NSU2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.81■□□□□ 0.12
TREX1Q9NSU2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 AC006058.4-201ENST00000624016 1670 ntBASIC15.81■□□□□ 0.12
TREX1Q9NSU2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 AC074338.1-201ENST00000416825 156 ntBASIC15.8■□□□□ 0.12
TREX1Q9NSU2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 AL589739.1-201ENST00000607720 493 ntBASIC15.8■□□□□ 0.12
TREX1Q9NSU2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 CETN4P-206ENST00000642099 2168 ntBASIC15.8■□□□□ 0.12
TREX1Q9NSU2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX1Q9NSU2 DBET-201ENST00000630918 3363 ntBASIC15.79■□□□□ 0.12
TREX1Q9NSU2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TREX1Q9NSU2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.79■□□□□ 0.12
TREX1Q9NSU2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
TREX1Q9NSU2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.79■□□□□ 0.12
TREX1Q9NSU2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TREX1Q9NSU2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TREX1Q9NSU2 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.79■□□□□ 0.12
TREX1Q9NSU2 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TREX1Q9NSU2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TREX1Q9NSU2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms