Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SDHAF3Q9NRP4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.65□□□□□ -0.06
SDHAF3Q9NRP4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SDHAF3Q9NRP4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.65□□□□□ -0.06
SDHAF3Q9NRP4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SDHAF3Q9NRP4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SDHAF3Q9NRP4 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SDHAF3Q9NRP4 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SDHAF3Q9NRP4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SDHAF3Q9NRP4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SDHAF3Q9NRP4 AC026691.1-201ENST00000602502 2017 ntBASIC14.65□□□□□ -0.06
SDHAF3Q9NRP4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
SDHAF3Q9NRP4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 TREML5P-201ENST00000421694 576 ntBASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 LINC00554-201ENST00000564841 3011 ntBASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 AC134407.2-201ENST00000625089 1978 ntBASIC14.64□□□□□ -0.07
SDHAF3Q9NRP4 CDC14C-201ENST00000428251 1719 ntBASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 LINC02447-202ENST00000501888 2146 ntBASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 BASP1P1-201ENST00000430708 665 ntBASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 AC055876.3-201ENST00000431496 288 ntBASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 AC241585.1-201ENST00000433527 519 ntBASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 AL512638.1-201ENST00000457493 794 ntBASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 AC097493.3-201ENST00000509725 367 ntBASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 DUX4L27-201ENST00000554796 1261 ntBASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 AC138649.4-201ENST00000612222 287 ntBASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 AL138828.2-201ENST00000615812 383 ntBASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms