Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 AC211486.1-202ENST00000416371 468 ntBASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 RBPMS2P1-201ENST00000437762 623 ntBASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 PHKG1P2-201ENST00000457537 863 ntBASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 AC211476.1-201ENST00000503899 468 ntBASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 MIR4313-201ENST00000580760 101 ntBASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 AC009093.7-201ENST00000623853 1223 ntBASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 AC144831.1-201ENST00000573312 2656 ntBASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
LRRC40Q9H9A6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 GPS2P2-201ENST00000430745 888 ntBASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 AC023141.5-201ENST00000458585 616 ntBASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 AC105021.1-202ENST00000570572 669 ntBASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms