Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 AC007389.4-201ENST00000454674 793 ntBASIC17.07■□□□□ 0.32
NXF3Q9H4D5 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 AC010319.3-201ENST00000597028 470 ntBASIC17.07■□□□□ 0.32
NXF3Q9H4D5 AL049840.4-201ENST00000602422 811 ntBASIC17.07■□□□□ 0.32
NXF3Q9H4D5 AL008721.1-201ENST00000609964 604 ntBASIC17.07■□□□□ 0.32
NXF3Q9H4D5 AL162274.1-201ENST00000617191 1098 ntBASIC17.07■□□□□ 0.32
NXF3Q9H4D5 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.07■□□□□ 0.32
NXF3Q9H4D5 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 AC112492.5-201ENST00000421897 457 ntBASIC17.06■□□□□ 0.32
NXF3Q9H4D5 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 ATP5G2P4-201ENST00000442175 420 ntBASIC17.06■□□□□ 0.32
NXF3Q9H4D5 VDAC1P7-201ENST00000462417 847 ntBASIC17.06■□□□□ 0.32
NXF3Q9H4D5 KRT18P43-201ENST00000469825 1281 ntBASIC17.06■□□□□ 0.32
NXF3Q9H4D5 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 AC008735.3-201ENST00000596646 500 ntBASIC17.06■□□□□ 0.32
NXF3Q9H4D5 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 AL603832.2-201ENST00000566195 2125 ntBASIC17.06■□□□□ 0.32
NXF3Q9H4D5 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 INTS4P2-202ENST00000614726 2019 ntBASIC17.06■□□□□ 0.32
NXF3Q9H4D5 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NXF3Q9H4D5 AC010491.1-201ENST00000563101 2797 ntBASIC17.06■□□□□ 0.32
NXF3Q9H4D5 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 AC112504.1-201ENST00000623415 1841 ntBASIC17.05■□□□□ 0.32
NXF3Q9H4D5 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 IGHV3-71-201ENST00000523324 359 ntBASIC17.05■□□□□ 0.32
NXF3Q9H4D5 KRT17P8-201ENST00000540749 863 ntBASIC17.05■□□□□ 0.32
NXF3Q9H4D5 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 AC124283.3-201ENST00000570869 594 ntBASIC17.05■□□□□ 0.32
NXF3Q9H4D5 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 AC133539.2-201ENST00000604757 467 ntBASIC17.05■□□□□ 0.32
NXF3Q9H4D5 CU634019.7-201ENST00000624153 1185 ntBASIC17.05■□□□□ 0.32
NXF3Q9H4D5 FP236241.2-201ENST00000624906 1185 ntBASIC17.05■□□□□ 0.32
NXF3Q9H4D5 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms