Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 KRT8P39-201ENST00000396270 1433 ntBASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 HNRNPUP1-201ENST00000554987 333 ntBASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 AC124283.3-201ENST00000570869 594 ntBASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 PCDHB17P-201ENST00000539533 2393 ntBASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 INTS4P2-202ENST00000614726 2019 ntBASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.48■□□□□ 0.39
UBE2OQ9C0C9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 Z97205.2-201ENST00000564697 1639 ntBASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 AC004898.1-201ENST00000451057 766 ntBASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 AL591846.1-201ENST00000451736 433 ntBASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 BX284668.4-201ENST00000453917 508 ntBASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 RPL13AP25-201ENST00000484130 612 ntBASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 AP002490.2-201ENST00000524791 560 ntBASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
UBE2OQ9C0C9 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
UBE2OQ9C0C9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.46■□□□□ 0.39
UBE2OQ9C0C9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2OQ9C0C9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.46■□□□□ 0.39
UBE2OQ9C0C9 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
UBE2OQ9C0C9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2OQ9C0C9 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
UBE2OQ9C0C9 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.46■□□□□ 0.39
UBE2OQ9C0C9 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
UBE2OQ9C0C9 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms