Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 GCSHP5-201ENST00000443090 522 ntBASIC12.95□□□□□ -0.34
NKX6-2Q9C056 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 SLC22A20-204ENST00000530038 1673 ntBASIC12.95□□□□□ -0.34
NKX6-2Q9C056 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 NUTM2HP-201ENST00000442076 2498 ntBASIC12.94□□□□□ -0.34
NKX6-2Q9C056 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 CYP2D8P-201ENST00000433633 1490 ntBASIC12.94□□□□□ -0.34
NKX6-2Q9C056 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 KLF4P1-201ENST00000412782 1185 ntBASIC12.94□□□□□ -0.34
NKX6-2Q9C056 ACTG1P4-201ENST00000425123 1122 ntBASIC12.94□□□□□ -0.34
NKX6-2Q9C056 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 GUSBP12-201ENST00000513727 720 ntBASIC12.94□□□□□ -0.34
NKX6-2Q9C056 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 KRT8P49-201ENST00000604166 1432 ntBASIC12.94□□□□□ -0.34
NKX6-2Q9C056 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NKX6-2Q9C056 DMBT1P1-203ENST00000636837 4628 ntBASIC12.93□□□□□ -0.34
NKX6-2Q9C056 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms