Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPF3BQ9BZI7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
UPF3BQ9BZI7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPF3BQ9BZI7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPF3BQ9BZI7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPF3BQ9BZI7 HLA-H-201ENST00000383620 1096 ntBASIC19■□□□□ 0.63
UPF3BQ9BZI7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19■□□□□ 0.63
UPF3BQ9BZI7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 AL592309.1-201ENST00000443127 649 ntBASIC19■□□□□ 0.63
UPF3BQ9BZI7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 GATB-205ENST00000508611 605 ntTSL 2 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
UPF3BQ9BZI7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 CYP4F24P-201ENST00000586049 1580 ntBASIC19■□□□□ 0.63
UPF3BQ9BZI7 AP3S2-216ENST00000617003 1561 ntBASIC19■□□□□ 0.63
UPF3BQ9BZI7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPF3BQ9BZI7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPF3BQ9BZI7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPF3BQ9BZI7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPF3BQ9BZI7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPF3BQ9BZI7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPF3BQ9BZI7 TMBIM7P-203ENST00000641617 1718 ntBASIC19■□□□□ 0.63
UPF3BQ9BZI7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
UPF3BQ9BZI7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 METTL21AP1-201ENST00000438852 635 ntBASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 CYMP-203ENST00000474680 1263 ntBASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 AL109954.1-202ENST00000564051 2148 ntBASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 AC239800.4-201ENST00000603712 296 ntBASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UPF3BQ9BZI7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 ELL2P1-201ENST00000413990 1906 ntBASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 AC006486.2-201ENST00000624246 2199 ntBASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 FAM8A3P-201ENST00000427218 844 ntBASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 MKNK2P1-201ENST00000437526 628 ntBASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 AP006288.1-201ENST00000446065 395 ntBASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 ACTG1P14-201ENST00000446382 1122 ntBASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 KRT8P23-201ENST00000560090 1207 ntBASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms