Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 SLC25A47P1-201ENST00000531577 414 ntBASIC16.51■□□□□ 0.23
LRRC3Q9BY71 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 AC233724.13-201ENST00000598383 410 ntBASIC16.51■□□□□ 0.23
LRRC3Q9BY71 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 AC234783.1-201ENST00000441761 496 ntBASIC16.5■□□□□ 0.23
LRRC3Q9BY71 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 AP005482.1-201ENST00000563722 1273 ntBASIC16.5■□□□□ 0.23
LRRC3Q9BY71 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 AC000095.1-201ENST00000603208 874 ntBASIC16.5■□□□□ 0.23
LRRC3Q9BY71 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 AC018665.1-201ENST00000622927 1362 ntBASIC16.5■□□□□ 0.23
LRRC3Q9BY71 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC3Q9BY71 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.49■□□□□ 0.23
LRRC3Q9BY71 MIR6799-201ENST00000620297 69 ntBASIC16.49■□□□□ 0.23
LRRC3Q9BY71 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 AL139384.1-201ENST00000612143 3047 ntBASIC16.49■□□□□ 0.23
LRRC3Q9BY71 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms