Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 AC091804.1-201ENST00000486888 567 ntBASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 MIR4741-201ENST00000579822 90 ntBASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 AC138028.6-201ENST00000616106 1482 ntBASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 NKILA-202ENST00000614771 2598 ntBASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 HOMER2P2-201ENST00000451621 847 ntBASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 BX284668.4-201ENST00000453917 508 ntBASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 IGHJ2P-201ENST00000454480 60 ntBASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 EEF1DP1-201ENST00000585891 896 ntBASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 RETN-203ENST00000629642 400 ntTSL 5 BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RTFDC1Q9BY42 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 AC015818.8-201ENST00000587907 1519 ntBASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 PCDHA12-202ENST00000613593 2588 ntBASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 AC018892.3-201ENST00000623986 2499 ntBASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 AL021578.1-201ENST00000613646 709 ntBASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTFDC1Q9BY42 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 MIR1202-201ENST00000408529 83 ntBASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 MTX1P1-201ENST00000440904 838 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms