Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 RPL5P21-201ENST00000404620 815 ntBASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 AC104692.2-201ENST00000603054 253 ntBASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.56■□□□□ 0.4
BPIFA3Q9BQP9 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 AC136604.1-201ENST00000418535 575 ntBASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 AC074386.1-202ENST00000463561 864 ntBASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 AC093909.1-201ENST00000504731 1122 ntBASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 AC018845.2-201ENST00000568326 409 ntBASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BPIFA3Q9BQP9 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 AKAP8P1-201ENST00000434743 1349 ntBASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 AL139010.1-201ENST00000454878 894 ntBASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 AC112191.1-201ENST00000523689 701 ntBASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 PDPK2P-202ENST00000562415 1191 ntBASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 AC064836.3-201ENST00000607928 673 ntBASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 AC008267.7-201ENST00000624570 1194 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms