Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ARID3AQ99856 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARID3AQ99856 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARID3AQ99856 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ARID3AQ99856 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.24■□□□□ 0.51
ARID3AQ99856 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ARID3AQ99856 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ARID3AQ99856 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARID3AQ99856 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
ARID3AQ99856 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARID3AQ99856 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ARID3AQ99856 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARID3AQ99856 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ARID3AQ99856 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ARID3AQ99856 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.23■□□□□ 0.51
ARID3AQ99856 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARID3AQ99856 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARID3AQ99856 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARID3AQ99856 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ARID3AQ99856 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
ARID3AQ99856 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
ARID3AQ99856 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC18.23■□□□□ 0.51
ARID3AQ99856 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
ARID3AQ99856 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ARID3AQ99856 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
ARID3AQ99856 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC18.23■□□□□ 0.51
ARID3AQ99856 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ARID3AQ99856 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.23■□□□□ 0.51
ARID3AQ99856 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
ARID3AQ99856 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC18.23■□□□□ 0.51
ARID3AQ99856 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.23■□□□□ 0.51
ARID3AQ99856 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ARID3AQ99856 AC108073.2-201ENST00000464002 357 ntBASIC18.23■□□□□ 0.51
ARID3AQ99856 IGHV3-22-201ENST00000520721 359 ntBASIC18.23■□□□□ 0.51
ARID3AQ99856 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARID3AQ99856 AC005593.1-201ENST00000624894 515 ntBASIC18.23■□□□□ 0.51
ARID3AQ99856 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ARID3AQ99856 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC18.23■□□□□ 0.51
ARID3AQ99856 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
ARID3AQ99856 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
ARID3AQ99856 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
ARID3AQ99856 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ARID3AQ99856 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.23■□□□□ 0.51
ARID3AQ99856 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ARID3AQ99856 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ARID3AQ99856 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ARID3AQ99856 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARID3AQ99856 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARID3AQ99856 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARID3AQ99856 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
ARID3AQ99856 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ARID3AQ99856 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.23■□□□□ 0.51
ARID3AQ99856 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARID3AQ99856 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARID3AQ99856 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARID3AQ99856 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ARID3AQ99856 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARID3AQ99856 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC18.22■□□□□ 0.51
ARID3AQ99856 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ARID3AQ99856 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.22■□□□□ 0.51
ARID3AQ99856 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ARID3AQ99856 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ARID3AQ99856 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ARID3AQ99856 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ARID3AQ99856 AL645728.1-201ENST00000366221 2101 ntBASIC18.22■□□□□ 0.51
ARID3AQ99856 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.22■□□□□ 0.51
ARID3AQ99856 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARID3AQ99856 GPALPP1-207ENST00000611650 899 ntBASIC18.22■□□□□ 0.51
ARID3AQ99856 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.22■□□□□ 0.51
ARID3AQ99856 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ARID3AQ99856 AC087386.2-201ENST00000623212 4637 ntBASIC18.22■□□□□ 0.51
ARID3AQ99856 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARID3AQ99856 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
ARID3AQ99856 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ARID3AQ99856 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ARID3AQ99856 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
ARID3AQ99856 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC18.22■□□□□ 0.51
ARID3AQ99856 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ARID3AQ99856 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARID3AQ99856 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARID3AQ99856 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARID3AQ99856 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARID3AQ99856 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARID3AQ99856 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ARID3AQ99856 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARID3AQ99856 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARID3AQ99856 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARID3AQ99856 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
ARID3AQ99856 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARID3AQ99856 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARID3AQ99856 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.21■□□□□ 0.51
ARID3AQ99856 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARID3AQ99856 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.21■□□□□ 0.51
ARID3AQ99856 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARID3AQ99856 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ARID3AQ99856 AC005089.1-201ENST00000619486 2241 ntBASIC18.21■□□□□ 0.51
ARID3AQ99856 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC18.21■□□□□ 0.51
ARID3AQ99856 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARID3AQ99856 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARID3AQ99856 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms