Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC008894.3-201ENST00000624324 3103 ntBASIC16.58■□□□□ 0.24
SMOQ99835 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
SMOQ99835 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMOQ99835 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.57■□□□□ 0.24
SMOQ99835 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMOQ99835 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.57■□□□□ 0.24
SMOQ99835 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.57■□□□□ 0.24
SMOQ99835 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.57■□□□□ 0.24
SMOQ99835 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMOQ99835 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMOQ99835 AL121723.1-201ENST00000445194 1519 ntBASIC16.57■□□□□ 0.24
SMOQ99835 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMOQ99835 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.57■□□□□ 0.24
SMOQ99835 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.57■□□□□ 0.24
SMOQ99835 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.57■□□□□ 0.24
SMOQ99835 MYCLP2-201ENST00000449268 967 ntBASIC16.57■□□□□ 0.24
SMOQ99835 ELK1P1-201ENST00000485699 580 ntBASIC16.57■□□□□ 0.24
SMOQ99835 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.57■□□□□ 0.24
SMOQ99835 AL596325.1-201ENST00000563991 1082 ntBASIC16.57■□□□□ 0.24
SMOQ99835 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.57■□□□□ 0.24
SMOQ99835 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SMOQ99835 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.57■□□□□ 0.24
SMOQ99835 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.57■□□□□ 0.24
SMOQ99835 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SMOQ99835 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMOQ99835 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMOQ99835 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMOQ99835 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
SMOQ99835 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
SMOQ99835 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMOQ99835 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.57■□□□□ 0.24
SMOQ99835 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMOQ99835 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.57■□□□□ 0.24
SMOQ99835 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMOQ99835 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMOQ99835 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMOQ99835 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMOQ99835 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.56■□□□□ 0.24
SMOQ99835 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SMOQ99835 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SMOQ99835 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMOQ99835 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SMOQ99835 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMOQ99835 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMOQ99835 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SMOQ99835 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.56■□□□□ 0.24
SMOQ99835 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMOQ99835 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMOQ99835 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMOQ99835 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.56■□□□□ 0.24
SMOQ99835 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SMOQ99835 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMOQ99835 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SMOQ99835 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.56■□□□□ 0.24
SMOQ99835 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.56■□□□□ 0.24
SMOQ99835 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.56■□□□□ 0.24
SMOQ99835 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.56■□□□□ 0.24
SMOQ99835 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.56■□□□□ 0.24
SMOQ99835 RN7SL692P-201ENST00000464677 288 ntBASIC16.56■□□□□ 0.24
SMOQ99835 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMOQ99835 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SMOQ99835 CTBP2P3-201ENST00000585629 1255 ntBASIC16.56■□□□□ 0.24
SMOQ99835 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.56■□□□□ 0.24
SMOQ99835 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.56■□□□□ 0.24
SMOQ99835 AC027307.3-201ENST00000594262 1100 ntBASIC16.56■□□□□ 0.24
SMOQ99835 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SMOQ99835 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.56■□□□□ 0.24
SMOQ99835 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMOQ99835 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMOQ99835 CICP13-201ENST00000422015 2789 ntBASIC16.56■□□□□ 0.24
SMOQ99835 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.56■□□□□ 0.24
SMOQ99835 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMOQ99835 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMOQ99835 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.56■□□□□ 0.24
SMOQ99835 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.56■□□□□ 0.24
SMOQ99835 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.56■□□□□ 0.24
SMOQ99835 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMOQ99835 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMOQ99835 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SMOQ99835 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMOQ99835 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMOQ99835 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.56■□□□□ 0.24
SMOQ99835 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.55■□□□□ 0.24
SMOQ99835 TNRC18P3-201ENST00000441896 2691 ntBASIC16.55■□□□□ 0.24
SMOQ99835 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SMOQ99835 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SMOQ99835 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMOQ99835 AC092127.1-201ENST00000567093 3455 ntBASIC16.55■□□□□ 0.24
SMOQ99835 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMOQ99835 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.55■□□□□ 0.24
SMOQ99835 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMOQ99835 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.55■□□□□ 0.24
SMOQ99835 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMOQ99835 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMOQ99835 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMOQ99835 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.55■□□□□ 0.24
SMOQ99835 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.55■□□□□ 0.24
SMOQ99835 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.55■□□□□ 0.24
SMOQ99835 AC036164.1-201ENST00000570544 333 ntBASIC16.55■□□□□ 0.24
SMOQ99835 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms