Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDC6Q99741 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.3■□□□□ 0.04
CDC6Q99741 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.3■□□□□ 0.04
CDC6Q99741 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.3■□□□□ 0.04
CDC6Q99741 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDC6Q99741 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDC6Q99741 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.3■□□□□ 0.04
CDC6Q99741 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDC6Q99741 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.3■□□□□ 0.04
CDC6Q99741 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.3■□□□□ 0.04
CDC6Q99741 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.3■□□□□ 0.04
CDC6Q99741 AL603756.1-201ENST00000606511 2163 ntBASIC15.3■□□□□ 0.04
CDC6Q99741 AL118508.1-201ENST00000613502 2345 ntBASIC15.3■□□□□ 0.04
CDC6Q99741 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDC6Q99741 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CDC6Q99741 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC6Q99741 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC6Q99741 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC6Q99741 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC6Q99741 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDC6Q99741 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CDC6Q99741 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC6Q99741 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC6Q99741 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC6Q99741 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CDC6Q99741 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC6Q99741 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.29■□□□□ 0.04
CDC6Q99741 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC6Q99741 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC6Q99741 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC6Q99741 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC6Q99741 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC6Q99741 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDC6Q99741 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDC6Q99741 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC6Q99741 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC6Q99741 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC6Q99741 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC6Q99741 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
CDC6Q99741 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC6Q99741 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC6Q99741 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDC6Q99741 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC6Q99741 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC6Q99741 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC6Q99741 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDC6Q99741 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.29■□□□□ 0.04
CDC6Q99741 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.29■□□□□ 0.04
CDC6Q99741 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.29■□□□□ 0.04
CDC6Q99741 AC106760.1-201ENST00000508690 800 ntBASIC15.29■□□□□ 0.04
CDC6Q99741 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.29■□□□□ 0.04
CDC6Q99741 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.29■□□□□ 0.04
CDC6Q99741 C2orf69P2-201ENST00000562032 1123 ntBASIC15.29■□□□□ 0.04
CDC6Q99741 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.29■□□□□ 0.04
CDC6Q99741 AC244669.2-201ENST00000612320 853 ntBASIC15.29■□□□□ 0.04
CDC6Q99741 AC005252.2-201ENST00000624630 1141 ntBASIC15.29■□□□□ 0.04
CDC6Q99741 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
CDC6Q99741 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC6Q99741 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC6Q99741 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC6Q99741 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC6Q99741 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CDC6Q99741 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC6Q99741 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC6Q99741 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC6Q99741 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.28■□□□□ 0.04
CDC6Q99741 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC6Q99741 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC6Q99741 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CDC6Q99741 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.28■□□□□ 0.04
CDC6Q99741 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC6Q99741 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC6Q99741 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.28■□□□□ 0.04
CDC6Q99741 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CDC6Q99741 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
CDC6Q99741 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CDC6Q99741 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC6Q99741 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CDC6Q99741 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC6Q99741 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.28■□□□□ 0.04
CDC6Q99741 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC6Q99741 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDC6Q99741 SLC25A24P2-201ENST00000415059 510 ntBASIC15.28■□□□□ 0.04
CDC6Q99741 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.28■□□□□ 0.04
CDC6Q99741 CALR4P-201ENST00000431943 946 ntBASIC15.28■□□□□ 0.04
CDC6Q99741 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.28■□□□□ 0.04
CDC6Q99741 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC6Q99741 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.28■□□□□ 0.04
CDC6Q99741 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.28■□□□□ 0.04
CDC6Q99741 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.28■□□□□ 0.04
CDC6Q99741 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC6Q99741 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC6Q99741 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.28■□□□□ 0.04
CDC6Q99741 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.28■□□□□ 0.04
CDC6Q99741 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.28■□□□□ 0.04
CDC6Q99741 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.28■□□□□ 0.04
CDC6Q99741 AC106872.11-201ENST00000605838 421 ntBASIC15.28■□□□□ 0.04
CDC6Q99741 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.28■□□□□ 0.04
CDC6Q99741 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC6Q99741 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms