Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM11Q96F44 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
TRIM11Q96F44 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM11Q96F44 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM11Q96F44 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM11Q96F44 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM11Q96F44 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM11Q96F44 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM11Q96F44 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM11Q96F44 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM11Q96F44 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM11Q96F44 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM11Q96F44 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRIM11Q96F44 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRIM11Q96F44 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM11Q96F44 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.83■□□□□ 0.28
TRIM11Q96F44 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM11Q96F44 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM11Q96F44 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.83■□□□□ 0.28
TRIM11Q96F44 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.83■□□□□ 0.28
TRIM11Q96F44 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM11Q96F44 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.83■□□□□ 0.28
TRIM11Q96F44 AC092127.1-201ENST00000567093 3455 ntBASIC16.83■□□□□ 0.28
TRIM11Q96F44 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.83■□□□□ 0.28
TRIM11Q96F44 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.83■□□□□ 0.28
TRIM11Q96F44 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM11Q96F44 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM11Q96F44 AL671883.3-201ENST00000603274 991 ntBASIC16.83■□□□□ 0.28
TRIM11Q96F44 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM11Q96F44 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM11Q96F44 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM11Q96F44 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM11Q96F44 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM11Q96F44 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM11Q96F44 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM11Q96F44 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 AC023157.3-201ENST00000619086 2088 ntBASIC16.82■□□□□ 0.28
TRIM11Q96F44 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM11Q96F44 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM11Q96F44 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM11Q96F44 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM11Q96F44 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM11Q96F44 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM11Q96F44 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM11Q96F44 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM11Q96F44 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM11Q96F44 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM11Q96F44 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM11Q96F44 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 AP000344.2-201ENST00000512987 629 ntBASIC16.82■□□□□ 0.28
TRIM11Q96F44 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 MIR3687-2-201ENST00000577708 61 ntBASIC16.82■□□□□ 0.28
TRIM11Q96F44 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 AC018529.1-201ENST00000613063 361 ntBASIC16.82■□□□□ 0.28
TRIM11Q96F44 MIR3687-1-201ENST00000614492 61 ntBASIC16.82■□□□□ 0.28
TRIM11Q96F44 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM11Q96F44 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM11Q96F44 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM11Q96F44 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM11Q96F44 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
TRIM11Q96F44 AC006058.4-201ENST00000624016 1670 ntBASIC16.81■□□□□ 0.28
TRIM11Q96F44 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM11Q96F44 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM11Q96F44 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM11Q96F44 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM11Q96F44 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
TRIM11Q96F44 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM11Q96F44 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRIM11Q96F44 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRIM11Q96F44 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
TRIM11Q96F44 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM11Q96F44 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM11Q96F44 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM11Q96F44 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM11Q96F44 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.81■□□□□ 0.28
TRIM11Q96F44 AL627223.1-201ENST00000416693 442 ntBASIC16.81■□□□□ 0.28
TRIM11Q96F44 AL645939.2-201ENST00000427340 991 ntBASIC16.81■□□□□ 0.28
TRIM11Q96F44 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM11Q96F44 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms