Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.33□□□□□ -0.12
PTP4A1Q93096 AC061975.2-201ENST00000581722 295 ntBASIC14.33□□□□□ -0.12
PTP4A1Q93096 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.33□□□□□ -0.12
PTP4A1Q93096 AC073389.1-201ENST00000595595 795 ntBASIC14.33□□□□□ -0.12
PTP4A1Q93096 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.33□□□□□ -0.12
PTP4A1Q93096 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTP4A1Q93096 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTP4A1Q93096 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTP4A1Q93096 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTP4A1Q93096 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.33□□□□□ -0.12
PTP4A1Q93096 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
PTP4A1Q93096 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PTP4A1Q93096 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTP4A1Q93096 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.33□□□□□ -0.12
PTP4A1Q93096 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTP4A1Q93096 CICP24-201ENST00000605464 2705 ntBASIC14.33□□□□□ -0.12
PTP4A1Q93096 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTP4A1Q93096 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PTP4A1Q93096 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.33□□□□□ -0.12
PTP4A1Q93096 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PTP4A1Q93096 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.33□□□□□ -0.12
PTP4A1Q93096 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
PTP4A1Q93096 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 AL137784.3-201ENST00000623858 2288 ntBASIC14.32□□□□□ -0.12
PTP4A1Q93096 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTP4A1Q93096 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTP4A1Q93096 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTP4A1Q93096 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PTP4A1Q93096 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTP4A1Q93096 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTP4A1Q93096 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTP4A1Q93096 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTP4A1Q93096 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTP4A1Q93096 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 AP002472.1-201ENST00000577490 586 ntBASIC14.32□□□□□ -0.12
PTP4A1Q93096 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 AC092865.6-201ENST00000642101 219 ntBASIC14.32□□□□□ -0.12
PTP4A1Q93096 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTP4A1Q93096 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTP4A1Q93096 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTP4A1Q93096 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTP4A1Q93096 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTP4A1Q93096 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PTP4A1Q93096 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTP4A1Q93096 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTP4A1Q93096 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PTP4A1Q93096 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PTP4A1Q93096 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTP4A1Q93096 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PTP4A1Q93096 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTP4A1Q93096 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.31□□□□□ -0.12
PTP4A1Q93096 FOXO1B-201ENST00000504678 1527 ntBASIC14.31□□□□□ -0.12
PTP4A1Q93096 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.31□□□□□ -0.12
PTP4A1Q93096 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.31□□□□□ -0.12
PTP4A1Q93096 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PTP4A1Q93096 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PTP4A1Q93096 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.31□□□□□ -0.12
PTP4A1Q93096 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.31□□□□□ -0.12
PTP4A1Q93096 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PTP4A1Q93096 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.31□□□□□ -0.12
PTP4A1Q93096 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.31□□□□□ -0.12
PTP4A1Q93096 POLD2P1-201ENST00000511220 997 ntBASIC14.31□□□□□ -0.12
PTP4A1Q93096 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.31□□□□□ -0.12
PTP4A1Q93096 AC243562.2-201ENST00000561247 970 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms