Protein–RNA interactions for Protein: Q8N8W4

PNPLA1, Patatin-like phospholipase domain-containing protein 1, humanhuman

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA1Q8N8W4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PNPLA1Q8N8W4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.13■□□□□ 0.17
PNPLA1Q8N8W4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.13■□□□□ 0.17
PNPLA1Q8N8W4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PNPLA1Q8N8W4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PNPLA1Q8N8W4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PNPLA1Q8N8W4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PNPLA1Q8N8W4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PNPLA1Q8N8W4 AC092850.2-201ENST00000623821 2697 ntBASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 AL353779.1-201ENST00000434793 351 ntBASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 AC009477.1-201ENST00000452936 217 ntBASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 AC061975.2-201ENST00000581722 295 ntBASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 AC007967.4-201ENST00000614700 386 ntBASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
PNPLA1Q8N8W4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 AC098614.1-201ENST00000368528 745 ntBASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 RN7SL752P-201ENST00000463779 287 ntBASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 HLA-V-204ENST00000476601 1289 ntBASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 AC098859.1-201ENST00000502915 1238 ntBASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 AL136982.4-201ENST00000437689 1740 ntBASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.11■□□□□ 0.17
PNPLA1Q8N8W4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PNPLA1Q8N8W4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PNPLA1Q8N8W4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PNPLA1Q8N8W4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.1■□□□□ 0.17
PNPLA1Q8N8W4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PNPLA1Q8N8W4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.1■□□□□ 0.17
PNPLA1Q8N8W4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.1■□□□□ 0.17
PNPLA1Q8N8W4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PNPLA1Q8N8W4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms