Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AF228730.6-201ENST00000641497 218 ntBASIC15.67■□□□□ 0.1
TRAM1L1Q8N609 AC084121.3-201ENST00000641716 218 ntBASIC15.67■□□□□ 0.1
TRAM1L1Q8N609 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAM1L1Q8N609 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TRAM1L1Q8N609 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAM1L1Q8N609 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAM1L1Q8N609 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAM1L1Q8N609 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAM1L1Q8N609 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAM1L1Q8N609 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAM1L1Q8N609 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.67■□□□□ 0.1
TRAM1L1Q8N609 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRAM1L1Q8N609 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRAM1L1Q8N609 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAM1L1Q8N609 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 TOMM22P5-201ENST00000416399 439 ntBASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 MEIS3P1-201ENST00000495167 958 ntBASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 AC004790.1-201ENST00000612686 536 ntBASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
TRAM1L1Q8N609 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 KRT18P64-201ENST00000434946 1219 ntBASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 AL589987.1-201ENST00000453380 819 ntBASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 TERF1P3-201ENST00000505638 1227 ntBASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 AC004233.3-201ENST00000607794 1269 ntBASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
TRAM1L1Q8N609 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms