Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF2Q8N5M1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF2Q8N5M1 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF2Q8N5M1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF2Q8N5M1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.31■□□□□ 0.2
ATPAF2Q8N5M1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATPAF2Q8N5M1 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 FO393414.2-201ENST00000405153 598 ntBASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 AL138828.2-201ENST00000615812 383 ntBASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATPAF2Q8N5M1 AC105917.1-201ENST00000506637 2539 ntBASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 RPL37AP1-201ENST00000412502 279 ntBASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 AC092183.1-201ENST00000469884 875 ntBASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 HNRNPUP1-201ENST00000554987 333 ntBASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATPAF2Q8N5M1 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 CICP13-201ENST00000422015 2789 ntBASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms